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PLM2_5_b1_sep16_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_9_1
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3..425
DNA (423bp) protein (141aa)
Two component transcriptional regulator, winged helix family Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LR04_ACIC1
two component transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KIH96639.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
PLM2_5_b1_sep16_scaffold_9_2
unknown

Not on your lists

805..1002
DNA (198bp) protein (66aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_9_3

Not on your lists

990..1199
DNA (210bp) protein (70aa)
Marine sediment metagenome DNA, contig: S01H1_S40920 {ECO:0000313|EMBL:GAG48150.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transporter
PLM2_5_b1_sep16_scaffold_9_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1199..1594
DNA (396bp) protein (132aa)
Rhodanese domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA22_CONWI
rhodanese
Rhodanese domain protein {ECO:0000313|EMBL:ADB53117.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_5
unknown

Not on your lists

1664..1903
DNA (240bp) protein (80aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_9_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1948..3780
DNA (1833bp) protein (611aa)
Nitrite and sulphite reductase 4Fe-4S region Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K2_CONWI
nitrite and sulfite reductase 4Fe-4S region
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ADB53936.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_7
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3777..4481
DNA (705bp) protein (235aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
Phosphoadenosine phosphosulfate reductase Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6C6_9BACL
phosphoadenosine phosphosulfate reductase
PLM2_5_b1_sep16_scaffold_9_8
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

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4552..5616
DNA (1065bp) protein (355aa)
sat2; sulfate adenylyltransferase (EC:2.7.7.4)
sulfate adenylyltransferase Tax=Lentibacillus jeotgali RepID=UPI0002628070
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
PLM2_5_b1_sep16_scaffold_9_9
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

5624..6181
DNA (558bp) protein (186aa)
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Adenylyl-sulfate kinase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDF5_THET1
PLM2_5_b1_sep16_scaffold_9_10
unknown

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6396..7205
DNA (810bp) protein (270aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_9_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7209..8018)
DNA (810bp) protein (270aa)
histidinol phosphatase Tax=Patulibacter americanus RepID=UPI0003B40564
Putative metal-dependent phosphoesterase (PHP family) {ECO:0000313|EMBL:EHN10593.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
PHP domain-containing protein
PLM2_5_b1_sep16_scaffold_9_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8109..9866
DNA (1758bp) protein (586aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K9_CONWI
carbamoyl-phosphate synthase L chain ATP-binding protein
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADB53943.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_13
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9880..11715)
DNA (1836bp) protein (612aa)
Sulfatase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDZ4_MEISD
Arylsulfatase A family protein {ECO:0000313|EMBL:KID28911.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
sulfatase
PLM2_5_b1_sep16_scaffold_9_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11799..12482)
DNA (684bp) protein (228aa)
haloacid dehalogenase Tax=Patulibacter americanus RepID=UPI0003B57FC4
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) {ECO:0000313|EMBL:ADB53947.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12580..13743
DNA (1164bp) protein (388aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Succinyl-CoA ligase [ADP-forming] subunit beta Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L4_CONWI
PLM2_5_b1_sep16_scaffold_9_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13823..14695
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L5_CONWI
succinyl-CoA synthetase subunit alpha
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_9_17
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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15034..16602
DNA (1569bp) protein (523aa)
Putative cell surface protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YX27_METPS
Putative cell surface protein {ECO:0000313|EMBL:BAI60999.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
cell surface protein
PLM2_5_b1_sep16_scaffold_9_18
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16712..17815
DNA (1104bp) protein (368aa)
Transcriptional regulator, gntr family protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F452_VERMA
GntR family transcriptional regulator
Transcriptional regulator, gntr family protein {ECO:0000313|EMBL:AEB47865.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM2_5_b1_sep16_scaffold_9_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17812..18525)
DNA (714bp) protein (238aa)
Iron (Metal) dependent repressor, DtxR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L9_CONWI
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ADB53953.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(18638..19453)
DNA (816bp) protein (272aa)
Sucrose-6F-phosphate phosphohydrolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0N8_CONWI
sucrose-6F-phosphate phosphohydrolase
Sucrose-6F-phosphate phosphohydrolase {ECO:0000313|EMBL:ADB53972.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_21
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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19477..20364
DNA (888bp) protein (296aa)
Dihydropteroate synthase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CN54_MYXFH
dihydropteroate synthase
Dihydropteroate synthase {ECO:0000313|EMBL:AEI67860.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM2_5_b1_sep16_scaffold_9_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20364..22643
DNA (2280bp) protein (760aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0P2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53976.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_23
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

22640..23131
DNA (492bp) protein (164aa)
Putative uncharacterized protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYP2_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03486.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM2_5_b1_sep16_scaffold_9_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23132..24709)
DNA (1578bp) protein (526aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC10_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51425.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_9_25
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24734..26200)
DNA (1467bp) protein (489aa)
Glycoside hydrolase 15-related Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD7_RUBXD
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ABG05341.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM2_5_b1_sep16_scaffold_9_trna_1
unknown

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26276..26348
DNA (73bp)
transferRNA Phe
PLM2_5_b1_sep16_scaffold_9_26
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26898..27275
DNA (378bp) protein (126aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
Ribonuclease VapC Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QLX5_9MYCO
vapC19; Conserved protein of unknown function with PIN domain, possible toxin VapC19
PLM2_5_b1_sep16_scaffold_9_27
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

27726..28559
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EFF9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83421.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
PLM2_5_b1_sep16_scaffold_9_28
unknown

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comp(28585..29268)
DNA (684bp) protein (228aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_9_29
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(30454..31251)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JF54_AGRRK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Displaying items 1-30 of 158 in total

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