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PLM2_5_b1_sep16_scaffold_942

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_942_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..252
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88599.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(274..1686)
DNA (1413bp) protein (471aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
tRNA modification GTPase MnmE Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
PLM2_5_b1_sep16_scaffold_942_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1686..2468)
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZS4_GEODF
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG88602.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2488..4206)
DNA (1719bp) protein (573aa)
Membrane protein insertase YidC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
Membrane protein oxaA
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(4865..5029)
DNA (165bp) protein (55aa)
Ribosomal protein L34 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5198..6595
DNA (1398bp) protein (466aa)
Chromosomal replication initiator protein DnaA Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_942_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6832..7944
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA polymerase III subunit beta Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
PLM2_5_b1_sep16_scaffold_942_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7997..8653
DNA (657bp) protein (219aa)
Putative transmembrane protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFZ7_ANASK
protein of unknown function DUF4126
Uncharacterized protein {ECO:0000313|EMBL:AHG88677.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_9
unknown

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comp(8701..9348)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_942_10
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10040..10960)
DNA (921bp) protein (307aa)
pknB; Transmembrane serine/threonine-protein kinase b Pknb (protein kinase b) (STPK B) (EC:2.7.11.1)
Serine/threonine protein kinase Tax=Mycobacterium xenopi RIVM700367 RepID=I0RXP4_MYCXE
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:EUA56673.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi 4042.;"
PLM2_5_b1_sep16_scaffold_942_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11186..12076
DNA (891bp) protein (297aa)
AraC family transcriptional regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
Helix-turn-helix, AraC domain-containing protein
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AHG88679.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12203..13333
DNA (1131bp) protein (377aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88681.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13289..13852)
DNA (564bp) protein (188aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Orotate phosphoribosyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
Orotate phosphoribosyltransferase
PLM2_5_b1_sep16_scaffold_942_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13933..15693
DNA (1761bp) protein (587aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Multi-sensor signal transduction histidine kinase Tax=Roseiflexus sp. (strain RS-1) RepID=A5USV9_ROSS1
ATP-binding region ATPase domain protein
PLM2_5_b1_sep16_scaffold_942_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15709..16653)
DNA (945bp) protein (315aa)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88684.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16730..18061
DNA (1332bp) protein (444aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88685.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18082..18702
DNA (621bp) protein (207aa)
phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:AHG88686.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phosphatidate cytidylyltransferase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
PLM2_5_b1_sep16_scaffold_942_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18804..19004
DNA (201bp) protein (67aa)
Cold shock DNA/RNA-binding protein Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHU4_GEOBB
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88687.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19130..22177
DNA (3048bp) protein (1016aa)
DNA polymerase I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
DNA polymerase I {ECO:0000313|EMBL:AHG88688.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA polymerase I
PLM2_5_b1_sep16_scaffold_942_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22453..22836
DNA (384bp) protein (128aa)
Putative pilin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin
Putative pilin {ECO:0000313|EMBL:BAH37053.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_942_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22937..23167
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88690.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23164..24540)
DNA (1377bp) protein (459aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37055.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_942_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24540..25982)
DNA (1443bp) protein (481aa)
Major facilitator superfamily MFS_1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHA4_9BACT
Permeases of the major facilitator superfamily
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_942_24
unknown

Not on your lists

26117..27073
DNA (957bp) protein (319aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_942_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27100..28017)
DNA (918bp) protein (306aa)
Putative ABC transporter permease protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I7_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG88716.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28014..29099)
DNA (1086bp) protein (362aa)
Putative ABC transporter permease protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG88715.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29118..29495)
DNA (378bp) protein (126aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88714.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29700..31172)
DNA (1473bp) protein (491aa)
Putative ABC transporter ATP-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I9_GEMAT
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG88712.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_942_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31169..31942)
DNA (774bp) protein (258aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative GTP cyclohydrolase 1 type 2 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J0_GEMAT
NGG1p interacting factor 3 protein, NIF3
PLM2_5_b1_sep16_scaffold_942_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31945..33006)
DNA (1062bp) protein (354aa)
Putative lipoprotein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J1_GEMAT
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:AHG88705.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 33 in total

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