ggKbase home page

PLM2_5_b1_sep16_scaffold_18902

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_18902_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..1980)
DNA (1980bp) protein (660aa)
Na-Ca exchanger/integrin-beta4 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QI07_SHELP
conserved hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM2_5_b1_sep16_scaffold_18902_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2005..2694)
DNA (690bp) protein (230aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJI0_CHLTF
SurA N-terminal domain {ECO:0000313|EMBL:CDM65769.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_18902_3
unknown

Not on your lists

comp(2658..2777)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18902_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2896..4542
DNA (1647bp) protein (549aa)
PAS domain S-box {ECO:0000313|EMBL:CDM64505.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDM64505.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Two-component histidine kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase
PLM2_5_b1_sep16_scaffold_18902_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4572..5801
DNA (1230bp) protein (410aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM64504.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Sigma-54 dependent transcriptional regulator/response regulator bin=GWC2_Nitrospirae-rel_56_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
two component, sigma54 specific, Fis family transcriptional regulator
Displaying 5 items

View Taxonomy