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PLM2_5_b1_sep16_scaffold_3552

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_3552_1
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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3..2999
DNA (2997bp) protein (999aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST1_KORVE
conserved hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
PLM2_5_b1_sep16_scaffold_3552_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3070..5136)
DNA (2067bp) protein (689aa)
Tetratricopeptide repeat/TPR repeat {ECO:0000313|EMBL:CDM64978.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
PLM2_5_b1_sep16_scaffold_3552_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5383..6423
DNA (1041bp) protein (347aa)
Nucleotidyltransferase {ECO:0000313|EMBL:CDM65330.1}; EC=2.7.7.13 {ECO:0000313|EMBL:CDM65330.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nucleotidyl transferase
PLM2_5_b1_sep16_scaffold_3552_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6435..7268
DNA (834bp) protein (278aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
formamidopyrimidine-DNA glycosylase (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase (Fpg) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE28_CHLTF
PLM2_5_b1_sep16_scaffold_3552_5
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7287..7904
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FTU8_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO70900.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM2_5_b1_sep16_scaffold_3552_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8059..9948
DNA (1890bp) protein (630aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methionine synthase I/5,10-methylenetetrahydrofolate reductase (EC:2.1.1.10)
Methylenetetrahydrofolate reductase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHT4_CHLTF
PLM2_5_b1_sep16_scaffold_3552_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9951..10913)
DNA (963bp) protein (321aa)
Alcohol dehydrogenase, zinc-binding domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6Q1_GEOUR
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABQ27469.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 7 items

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