ggKbase home page

PLM2_5_b1_sep16_scaffold_25392

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_25392_1
unknown

Not on your lists

3..125
DNA (123bp) protein (41aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000378B483
PLM2_5_b1_sep16_scaffold_25392_2
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(94..942)
DNA (849bp) protein (283aa)
Oxidoreductase Tax=Microscilla marina ATCC 23134 RepID=A1ZUU7_9BACT
Oxidoreductase {ECO:0000313|EMBL:EAY25851.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
putative Fe-S protein
PLM2_5_b1_sep16_scaffold_25392_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1535..1849
DNA (315bp) protein (105aa)
10 kDa chaperonin Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG61_CHLTF
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Co-chaperonin GroES (HSP10)
PLM2_5_b1_sep16_scaffold_25392_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1975..3618
DNA (1644bp) protein (548aa)
60 kDa chaperonin Tax=Solibacter usitatus (strain Ellin6076) RepID=CH60_SOLUE
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
groEL; molecular chaperone GroEL
PLM2_5_b1_sep16_scaffold_25392_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3767..4075
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VAA8_9CYAN
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM2_5_b1_sep16_scaffold_25392_6
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4039..4290
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Microcystis RepID=I4FCT2_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCH93457.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9432.;"
Zinc finger, YgiT-type
PLM2_5_b1_sep16_scaffold_25392_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4659..4811
DNA (153bp) protein (51aa)
Alpha/beta hydrolase fold protein Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JR02_HYPDA bin=16ft_combo_ws3_JS1 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alpha/beta hydrolase fold protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 7 items

View Taxonomy