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PLM2_5_b1_sep16_scaffold_532

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_532_1
unknown

Not on your lists

1..144
DNA (144bp) protein (48aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_532_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

227..1417
DNA (1191bp) protein (397aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cysteine desulfurase Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GGE6_9FIRM
cysteine desulfurase
PLM2_5_b1_sep16_scaffold_532_3
unknown

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comp(1422..1850)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_532_4
unknown

Not on your lists

comp(2048..2272)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_532_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2508..4910
DNA (2403bp) protein (801aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U4Z9_9CYAN
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM66668.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
PLM2_5_b1_sep16_scaffold_532_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4920..5381)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59053.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM2_5_b1_sep16_scaffold_532_7
unknown

Not on your lists

5846..6124
DNA (279bp) protein (93aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_532_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6206..9025)
DNA (2820bp) protein (940aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:CDM65989.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDM65989.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGV5_CHLTF
PLM2_5_b1_sep16_scaffold_532_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9132..9989
DNA (858bp) protein (286aa)
nucleoside-diphosphate-sugar epimerase (EC:5.1.3.10)
Nucleoside-diphosphate-sugar epimerase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDD2_CHLTF
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDM65988.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_532_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10076..11149
DNA (1074bp) protein (358aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] bin=bin3_NC10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:CDM65987.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipopolysaccharide heptosyltransferase II
PLM2_5_b1_sep16_scaffold_532_11
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11109..11657
DNA (549bp) protein (183aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2).;"
D,D-heptose 1,7-bisphosphate phosphatase Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGN1_GEOBB
gmhB; D-glycero-D-mannoheptose-1,7-bisphosphate phosphatase
PLM2_5_b1_sep16_scaffold_532_12

Not on your lists

comp(11658..12029)
DNA (372bp) protein (124aa)
mannose-6-phosphate isomerase (EC:5.3.1.8)
Smu11C Tax=uncultured organism RepID=Q0GNJ9_9ZZZZ
Smu11C {ECO:0000313|EMBL:ABI21603.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
PLM2_5_b1_sep16_scaffold_532_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12047..13792
DNA (1746bp) protein (582aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PAS domain S-box protein (EC:2.7.13.3)
PAS domain S-box Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFY2_CHLTF
PLM2_5_b1_sep16_scaffold_532_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13895..15289
DNA (1395bp) protein (465aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF85_CHLTF
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:CDM65572.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
two component, sigma54 specific, Fis family transcriptional regulator
PLM2_5_b1_sep16_scaffold_532_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15558..16037
DNA (480bp) protein (160aa)
Prepilin-type N-terminal cleavage/methylation domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD85_CHLTF
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDM65570.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
PLM2_5_b1_sep16_scaffold_532_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16343..16822
DNA (480bp) protein (160aa)
Prepilin-type N-terminal cleavage/methylation domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD85_CHLTF
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDM65570.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
PLM2_5_b1_sep16_scaffold_532_17
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17299..19281
DNA (1983bp) protein (661aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHD2_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH48389.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM2_5_b1_sep16_scaffold_532_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

19310..20170
DNA (861bp) protein (287aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE31_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11093.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM2_5_b1_sep16_scaffold_532_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20170..21105
DNA (936bp) protein (312aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE30_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65567.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_532_20
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

21163..22473
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=Aeromonas salmonicida subsp. pectinolytica 34mel RepID=T0QPD1_AERSA
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
Displaying 20 items

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