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PLM2_5_b1_sep16_scaffold_535

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_535_1

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2..526
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJ84_LYNSP
GDSL-like Lipase/Acylhydrolase family {ECO:0000313|EMBL:AIA19133.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
G-D-S-L family lipolytic protein
PLM2_5_b1_sep16_scaffold_535_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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904..2388
DNA (1485bp) protein (495aa)
Fe-S oxidoreductase {ECO:0000313|EMBL:CDM65990.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative with similarity to BchE, but NOT Mg-protoporphyrin monomethyl ester cyclase (anaerobic) bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
radical SAM protein
PLM2_5_b1_sep16_scaffold_535_3
unknown

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comp(2385..3575)
DNA (1191bp) protein (397aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_535_4
unknown

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comp(3633..4475)
DNA (843bp) protein (281aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_535_5
unknown

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comp(4497..5009)
DNA (513bp) protein (171aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_535_6
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5096..6415)
DNA (1320bp) protein (440aa)
putative PAS/PAC sensor protein Tax=Gemmata obscuriglobus RepID=UPI00016C469F
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADP70763.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
PLM2_5_b1_sep16_scaffold_535_7
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(6427..6759)
DNA (333bp) protein (111aa)
KaiB-like protein 1 bin=GWD2_Nitrospirae-related_57_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
KaiB domain-containing protein
Tax=GWF2_Lentisphaerae_57_35_curated
PLM2_5_b1_sep16_scaffold_535_8
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6766..7089)
DNA (324bp) protein (108aa)
KaiB domain-containing protein Tax=Acidovorax sp. CF316 RepID=J1EFI2_9BURK
KaiB domain-containing protein {ECO:0000313|EMBL:EJE50979.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Circadian oscillation regulator KaiB
PLM2_5_b1_sep16_scaffold_535_9
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7095..8831)
DNA (1737bp) protein (579aa)
Circadian clock protein kinase kaiC {ECO:0000313|EMBL:EGF90471.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EGF90471.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
circadian clock protein KaiC (EC:2.7.11.1)
Circadian clock protein kinase kaiC Tax=Asticcacaulis biprosthecum C19 RepID=F4QQI4_9CAUL
PLM2_5_b1_sep16_scaffold_535_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9075..10097
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037EF4CB
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM2_5_b1_sep16_scaffold_535_11
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(10107..11756)
DNA (1650bp) protein (550aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Urocanate hydratase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6R2_CALAS
hutU; urocanate hydratase
PLM2_5_b1_sep16_scaffold_535_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11868..12314
DNA (447bp) protein (149aa)
hypothetical protein Tax=Arenimonas oryziterrae RepID=UPI0003B5D353
Uncharacterized protein {ECO:0000313|EMBL:AKC88445.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_535_13
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(12317..13333)
DNA (1017bp) protein (339aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037C4E7A
Methyltransferase type 12 {ECO:0000313|EMBL:KGF73250.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
methyltransferase type 12
PLM2_5_b1_sep16_scaffold_535_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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13461..14735
DNA (1275bp) protein (425aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Imidazolonepropionase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I699_CALAS
hutI; imidazolonepropionase
PLM2_5_b1_sep16_scaffold_535_15
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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14788..16326
DNA (1539bp) protein (513aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Histidine ammonia-lyase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4T1_CALAS
hutH; histidine ammonia-lyase
PLM2_5_b1_sep16_scaffold_535_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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16311..17966
DNA (1656bp) protein (552aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D5J2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24527.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM2_5_b1_sep16_scaffold_535_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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17975..18751
DNA (777bp) protein (259aa)
D-alanyl-D-alanine carboxypeptidase Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QXD2_NOSS7
Uncharacterized protein {ECO:0000313|EMBL:CDM64686.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
D-alanyl-D-alanine carboxypeptidase
PLM2_5_b1_sep16_scaffold_535_18

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comp(18769..20121)
DNA (1353bp) protein (451aa)
Uncharacterized protein Tax=uncultured soil bacterium RepID=L0MPL7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGB85075.1}; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_535_19

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comp(20167..20883)
DNA (717bp) protein (239aa)
PepM Tax=uncultured soil bacterium RepID=L0MLH7_9BACT
PepM {ECO:0000313|EMBL:AGB85074.1}; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
peptidase M23
PLM2_5_b1_sep16_scaffold_535_trna_1
unknown

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comp(20967..21040)
DNA (74bp)
transferRNA Arg
PLM2_5_b1_sep16_scaffold_535_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(21093..21521)
DNA (429bp) protein (143aa)
Cytochrome c class I Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB42_NIAKG
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEW01389.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM2_5_b1_sep16_scaffold_535_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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21643..22416
DNA (774bp) protein (258aa)
Penicilin amidase {ECO:0000313|EMBL:CDM64116.1}; EC=3.5.1.11 {ECO:0000313|EMBL:CDM64116.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Penicillin acylase like protein (EC:3.5.1.11)
Penicillin acylase like protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH87_CHLTF
Displaying 22 items

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