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PLM2_5_b1_sep16_scaffold_910

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_910_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1..852)
DNA (852bp) protein (284aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Thiothrix nivea DSM 5205 RepID=I3BV09_9GAMM
PLM2_5_b1_sep16_scaffold_910_2
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1077..2357
DNA (1281bp) protein (427aa)
Uncharacterized protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RCH8_CUPTR
PBS lyase {ECO:0000313|EMBL:EYS87932.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_910_3
unknown

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2604..2927
DNA (324bp) protein (108aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_910_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2986..5004
DNA (2019bp) protein (673aa)
UvrABC system protein B Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH67_CHLTF
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
excinuclease ABC subunit B
PLM2_5_b1_sep16_scaffold_910_5
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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5048..6535
DNA (1488bp) protein (496aa)
D-lactate dehydrogenase (Cytochrome) Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX64_CHLT3
FAD-linked oxidase {ECO:0000313|EMBL:KER09596.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
D-lactate dehydrogenase
PLM2_5_b1_sep16_scaffold_910_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6591..7277
DNA (687bp) protein (229aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDM66757.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative Beta-phosphoglucomutase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
haloacid dehalogenase-like hydrolase
PLM2_5_b1_sep16_scaffold_910_7
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7294..8787
DNA (1494bp) protein (498aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5W1H4_STRCU
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_49_15_curated
PLM2_5_b1_sep16_scaffold_910_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8793..10382
DNA (1590bp) protein (530aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XBP2_9BACT
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEF62927.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
drug resistance MFS transporter, drug:H+ antiporter-1 family protein
PLM2_5_b1_sep16_scaffold_910_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10533..11477
DNA (945bp) protein (315aa)
Transcriptional regulator {ECO:0000313|EMBL:CDM65446.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RuBisCO operon transcriptional regulator bin=bin3_NC10 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
LysR family transcriptional regulator
PLM2_5_b1_sep16_scaffold_910_10
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11545..12234
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K347_DESAC
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EAT17127.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
two comoponent transcriptional regulator
PLM2_5_b1_sep16_scaffold_910_11
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12231..13610
DNA (1380bp) protein (460aa)
Signal transduction histidine kinase (EC:2.7.13.3)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D6038
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM2_5_b1_sep16_scaffold_910_12
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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comp(13607..13969)
DNA (363bp) protein (121aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000301CD77
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
PLM2_5_b1_sep16_scaffold_910_13

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comp(13987..16734)
DNA (2748bp) protein (916aa)
AMP-dependent synthetase and ligase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMP1_KORVE
AMP-binding enzyme {ECO:0000313|EMBL:AIA13523.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
AMP-dependent synthetase/ligase
PLM2_5_b1_sep16_scaffold_910_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(16803..17792)
DNA (990bp) protein (330aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMA8_CORCM
Uncharacterized protein {ECO:0000313|EMBL:CDM65297.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_910_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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18919..19323
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJL6_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42934.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 15 items

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