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PLM2_5_b1_sep16_scaffold_6261

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_6261_1

Not on your lists

comp(2..406)
DNA (405bp) protein (135aa)
Carbonic anhydrase Tax=Azoarcus sp. KH32C RepID=H0PRL5_9RHOO
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AIA16430.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
carbonic anhydrase
PLM2_5_b1_sep16_scaffold_6261_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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486..1289
DNA (804bp) protein (268aa)
MoxR-like ATPase (EC:1.7.2.5)
MoxR-like ATPase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJT6_CHLTF
MoxR-like ATPase {ECO:0000313|EMBL:CDM66877.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_6261_3
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1403..1888
DNA (486bp) protein (162aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB Tax=Fulvivirga imtechensis AK7 RepID=L8K2S6_9BACT
PLM2_5_b1_sep16_scaffold_6261_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1998..2291)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P9_GEMAT
Fe-S cluster protector protein {ECO:0000313|EMBL:CDM66607.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_6261_5
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2426..2881)
DNA (456bp) protein (152aa)
Bacterioferritin comigratory protein, thiol peroxidase, putative Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B6B3_PELLD
bacterioferritin comigratory protein, thiol peroxidase
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM2_5_b1_sep16_scaffold_6261_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2965..3972)
DNA (1008bp) protein (336aa)
Pyruvate formate lyase activating protein-like uncharacterized Fe-S protein {ECO:0000313|EMBL:CDM66609.1}; EC=1.97.1.4 {ECO:0000313|EMBL:CDM66609.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Radical SAM domain protein Tax=Melioribacter roseus (strain P3M) RepID=I6Z3Y4_MELRP
Radical SAM domain protein
PLM2_5_b1_sep16_scaffold_6261_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3935..4558)
DNA (624bp) protein (208aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI000379112C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM2_5_b1_sep16_scaffold_6261_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4600..5595
DNA (996bp) protein (332aa)
Putative esterase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEJ0_THET1
Predicted esterase {ECO:0000313|EMBL:CDM66435.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative esterase
PLM2_5_b1_sep16_scaffold_6261_9

Not on your lists

comp(5686..6546)
DNA (861bp) protein (287aa)
Delta-9 acyl-phospholipid desaturase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIX9_KORVE
Fatty acid desaturase {ECO:0000313|EMBL:AIA12259.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Delta-9 acyl-phospholipid desaturase
PLM2_5_b1_sep16_scaffold_6261_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(6652..7083)
DNA (432bp) protein (144aa)
Cell division protein Tax=Brevibacillus panacihumi W25 RepID=V6M8W8_9BACL
cell division inhibitor SULA
Cell division inhibitor SULA {ECO:0000313|EMBL:AIE83389.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM2_5_b1_sep16_scaffold_6261_11
unknown

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comp(7085..7420)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_6261_12

Not on your lists

comp(7526..8050)
DNA (525bp) protein (175aa)
AraC-like regulator Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJY7_9BURK
Marine sediment metagenome DNA, contig: S01H1_S25870 {ECO:0000313|EMBL:GAG37950.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cupin 2 domain-containing protein
PLM2_5_b1_sep16_scaffold_6261_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8119..9264)
DNA (1146bp) protein (382aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Radical SAM domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Q8_SOLUE
radical SAM domain-containing protein
PLM2_5_b1_sep16_scaffold_6261_14
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9309..9860
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Mariniradius saccharolyticus AK6 RepID=M7XKD4_9BACT
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
PLM2_5_b1_sep16_scaffold_6261_15
unknown

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comp(9872..10084)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_6261_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10101..10358)
DNA (258bp) protein (86aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QI80_9ZZZZ
PLM2_5_b1_sep16_scaffold_6261_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10516..10833)
DNA (318bp) protein (106aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative periplasmic solute-binding protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN3_CHLTF
putative periplasmic solute-binding protein
PLM2_5_b1_sep16_scaffold_6261_18
unknown

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10887..11141
DNA (255bp) protein (85aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_6261_19
unknown

Not on your lists

11202..11915
DNA (714bp) protein (238aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_6261_20
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

11912..12550
DNA (639bp) protein (213aa)
Putative metal-dependent hydrolase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFG6_CHLTF
putative metal-dependent hydrolase
Tax=RBG_16_Spirochaetes_49_21_curated
PLM2_5_b1_sep16_scaffold_6261_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12552..12917
DNA (366bp) protein (122aa)
hypothetical protein Tax=Deinococcus wulumuqiensis RepID=UPI00034C9D24
Predicted methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:CDM64257.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methylated DNA-protein cysteine methyltransferase
PLM2_5_b1_sep16_scaffold_6261_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12926..13777)
DNA (852bp) protein (284aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=PPNK_GEODF
PLM2_5_b1_sep16_scaffold_6261_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13831..14325)
DNA (495bp) protein (165aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002FABC5C
Putative N-acetyltransferase {ECO:0000313|EMBL:EYF04328.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
N-acetyltransferase GCN5
PLM2_5_b1_sep16_scaffold_6261_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14415..16520
DNA (2106bp) protein (702aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Parvulin-like peptidyl-prolyl isomerase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK01_CHLTF
Parvulin-like peptidyl-prolyl isomerase
PLM2_5_b1_sep16_scaffold_6261_25
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(16566..17984)
DNA (1419bp) protein (473aa)
Divalent anion:Na+ symporter, DASS family Tax=uncultured Acidobacteria bacterium RepID=H5SFF6_9BACT
Divalent anion:Na+ symporter, DASS family {ECO:0000313|EMBL:BAL54892.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
anion transporter
PLM2_5_b1_sep16_scaffold_6261_26
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18046..18576)
DNA (531bp) protein (177aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM2_5_b1_sep16_scaffold_6261_27
Streptococcus parauberis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18576..18755)
DNA (180bp) protein (60aa)
hypothetical protein Tax=Vitreoscilla stercoraria RepID=UPI000364F370
branched-chain amino acid transport ATP-binding protein
Branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:EMG26511.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus parauberis KRS-02083.;"
PLM2_5_b1_sep16_scaffold_6261_28
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(18808..19182)
DNA (375bp) protein (125aa)
S23 ribosomal protein bin=GWC2_Planctomycetes_45_44 species=Calothrix parietina genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
S23 ribosomal protein
Tax=GWC2_Planctomycetes_45_44_curated
PLM2_5_b1_sep16_scaffold_6261_29
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(19207..19350)
DNA (144bp) protein (48aa)
ABC transporter related Tax=Clostridium RepID=A6M3H1_CLOB8
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Displaying 29 items

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