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PLM2_5_b1_sep16_scaffold_6565

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_6565_1

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comp(3..788)
DNA (786bp) protein (262aa)
von Willebrand factor type A domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKM8_CHLTF
VWFA-related Acidobacterial domain {ECO:0000313|EMBL:AIA14930.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
von Willebrand factor type A domain-containing protein
PLM2_5_b1_sep16_scaffold_6565_2

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comp(793..1338)
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA18056.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM2_5_b1_sep16_scaffold_6565_3

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comp(1344..1988)
DNA (645bp) protein (215aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI0_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AIA18057.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_6565_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2066..2842)
DNA (777bp) protein (259aa)
Glycosyl transferase {ECO:0000313|EMBL:CDM65372.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cell wall biosynthesis glycosyltransferase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
family 2 glycosyl transferase
PLM2_5_b1_sep16_scaffold_6565_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2921..4741)
DNA (1821bp) protein (607aa)
Outer membrane protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LES3_CHLTF
Outer membrane protein {ECO:0000313|EMBL:CDM65371.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
outer membrane protein
PLM2_5_b1_sep16_scaffold_6565_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4952..5959
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLV8_CHLTF
PLM2_5_b1_sep16_scaffold_6565_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5985..7298
DNA (1314bp) protein (438aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase bin=GWF1_Spirochaetes_51_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
PLM2_5_b1_sep16_scaffold_6565_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7335..8060
DNA (726bp) protein (242aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Triosephosphate isomerase bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
tpiA; triosephosphate isomerase
PLM2_5_b1_sep16_scaffold_6565_9
unknown

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comp(8080..8541)
DNA (462bp) protein (154aa)

This feature has no annotations

Displaying 9 items

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