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PLM2_5_b1_sep16_scaffold_14000

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_14000_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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60..749
DNA (690bp) protein (230aa)
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rex; redox-sensing transcriptional repressor rex bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rex; redox-sensing transcriptional repressor rex
PLM2_5_b1_sep16_scaffold_14000_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1160..1960
DNA (801bp) protein (267aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:CDM64466.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CDM64466.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Class II aldolase/adducin family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C84_SOLUE
class II aldolase/adducin family protein
PLM2_5_b1_sep16_scaffold_14000_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2010..2291
DNA (282bp) protein (94aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67065.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
microcompartments protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
microcompartments protein
PLM2_5_b1_sep16_scaffold_14000_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2360..2629
DNA (270bp) protein (90aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C82_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67066.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
PLM2_5_b1_sep16_scaffold_14000_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2636..2917
DNA (282bp) protein (94aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C81_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67067.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
PLM2_5_b1_sep16_scaffold_14000_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2918..3199
DNA (282bp) protein (94aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C80_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67068.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
PLM2_5_b1_sep16_scaffold_14000_7
CG_Cyano_02, Cyanobacteria, Bacteria

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3204..3662
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Desulfovibrio fructosivorans JJ RepID=E1JYL8_DESFR
Tax=CG_Cyano_02
PLM2_5_b1_sep16_scaffold_14000_8
unknown

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3662..3982
DNA (321bp) protein (107aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_14000_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3993..4634)
DNA (642bp) protein (214aa)
LemA Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRH9_KORVE
Uncharacterized protein {ECO:0000313|EMBL:CDM67070.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_14000_10

Not on your lists

comp(4671..5387)
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA13011.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
PLM2_5_b1_sep16_scaffold_14000_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5392..6231)
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Pedobacter sp. BAL39 RepID=A6EFN8_9SPHI
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:CDM67072.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
Displaying 11 items

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