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PLM2_5_b1_sep16_scaffold_2019

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2019_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3..899
DNA (897bp) protein (299aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFJ9_CHLTF
PLM2_5_b1_sep16_scaffold_2019_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

906..2303
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UDP-N-acetylmuramate--L-alanine ligase Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXB6_DESAC
UDP-N-acetylmuramate--L-alanine ligase
PLM2_5_b1_sep16_scaffold_2019_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2318..3157
DNA (840bp) protein (280aa)
peptide ABC transporter permease Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B48E65
Cell division septal protein {ECO:0000313|EMBL:CDM67085.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FtsQ; cell division septal protein
PLM2_5_b1_sep16_scaffold_2019_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3170..4408
DNA (1239bp) protein (413aa)
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cell division protein FtsA; K03590 cell division protein FtsA bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cell division protein FtsA
PLM2_5_b1_sep16_scaffold_2019_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4551..5681
DNA (1131bp) protein (377aa)
Cell division protein FtsZ Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFJ4_CHLTF
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cell division protein FtsZ
PLM2_5_b1_sep16_scaffold_2019_6
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5883..8162
DNA (2280bp) protein (760aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035DAA0A
Uncharacterized protein {ECO:0000313|EMBL:CCM78436.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
sensory box histidine kinase
PLM2_5_b1_sep16_scaffold_2019_7
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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8365..9477
DNA (1113bp) protein (371aa)
TPR repeat-containing protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
serine protease
Tax=RBG_16_Zixibacteria_40_9_curated
PLM2_5_b1_sep16_scaffold_2019_8
unknown

Not on your lists

comp(9482..9775)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2019_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9973..10494
DNA (522bp) protein (174aa)
YtkA {ECO:0000313|EMBL:CDM64327.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_2019_10
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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10510..11223
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U9R3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY76693.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
PLM2_5_b1_sep16_scaffold_2019_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11263..13575
DNA (2313bp) protein (771aa)
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:CDM64328.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND family metal ion efflux pump inner membrane protein
Displaying 11 items

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