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PLM2_5_b1_sep16_scaffold_2106

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2106_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..468
DNA (468bp) protein (156aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z3Y9_9BACT
PLM2_5_b1_sep16_scaffold_2106_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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500..748
DNA (249bp) protein (83aa)
peptidase Tax=Hippea alviniae RepID=UPI0003B7A9D4
antitoxin MazE
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM2_5_b1_sep16_scaffold_2106_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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742..1062
DNA (321bp) protein (107aa)
growth inhibitor PemK Tax=Hippea alviniae RepID=UPI0003B4DCAB
transcriptional modulator of MazE/toxin MazF
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM2_5_b1_sep16_scaffold_2106_4
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1052..1525
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZXE5_DESOH
hypothetical protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
PLM2_5_b1_sep16_scaffold_2106_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1568..2521)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7V3_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39824.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM2_5_b1_sep16_scaffold_2106_6
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2497..2883)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EGR7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83879.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2106_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2919..3563)
DNA (645bp) protein (215aa)
hypothetical protein Tax=Leifsonia sp. 109 RepID=UPI00036BF21A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39826.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM2_5_b1_sep16_scaffold_2106_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3787..4596)
DNA (810bp) protein (270aa)
MazG family protein {ECO:0000313|EMBL:CDM64519.1}; EC=3.6.1.8 {ECO:0000313|EMBL:CDM64519.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
MazG family protein Tax=Geobacter sp. (strain M21) RepID=C6E1Q7_GEOSM
mazG; nucleoside triphosphate pyrophosphohydrolase
PLM2_5_b1_sep16_scaffold_2106_9
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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4663..5268
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ9_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11061.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM2_5_b1_sep16_scaffold_2106_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5357..6118
DNA (762bp) protein (254aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI01_CHLTF
Metal-dependent hydrolase, beta-lactamase superfamily I {ECO:0000313|EMBL:CDM64517.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
beta-lactamase superfamily metal-dependent hydrolase
PLM2_5_b1_sep16_scaffold_2106_11
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

6404..8800
DNA (2397bp) protein (799aa)
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Ribonucleoside-diphosphate reductase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKB8_CHLTF
PLM2_5_b1_sep16_scaffold_2106_12

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8833..9186
DNA (354bp) protein (118aa)
CHP02436-containing protein Tax=Pseudanabaena biceps PCC 7429 RepID=L8N3D1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKK76505.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2106_13
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9225..10223
DNA (999bp) protein (333aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ribonucleoside-diphosphate reductase Tax=Dyella japonica RepID=UPI0003782257
ribonucleoside-diphosphate reductase
PLM2_5_b1_sep16_scaffold_2106_14
unknown

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comp(10275..10871)
DNA (597bp) protein (199aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2106_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10943..11500)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Clostridium ultunense Esp RepID=M1Z3M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92636.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2106_16
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11577..11846)
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DE72_PECCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT14508.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (strain PC1).;"
PLM2_5_b1_sep16_scaffold_2106_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(11911..12222)
DNA (312bp) protein (104aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002FFC06C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42467.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM2_5_b1_sep16_scaffold_2106_18
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(12296..12763)
DNA (468bp) protein (156aa)
Activator of Hsp90 ATPase 1 family protein bin=GWF2_Melioribacter_38_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
activator of hsp90 ATPase 1 family protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM2_5_b1_sep16_scaffold_2106_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12766..13089)
DNA (324bp) protein (108aa)
Transcriptional regulator, ArsR family Tax=Niabella soli DSM 19437 RepID=H1NN05_9SPHI
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHF15405.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PLM2_5_b1_sep16_scaffold_2106_20
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(13172..13360)
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE11361.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
Displaying 20 items

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