ggKbase home page

PLM2_5_b1_sep16_scaffold_2504

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2504_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(265..978)
DNA (714bp) protein (238aa)
Outer membrane lipoprotein-sorting protein {ECO:0000313|EMBL:CDM64963.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_2504_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1002..1676)
DNA (675bp) protein (225aa)
Outer membrane lipoprotein-sorting protein {ECO:0000313|EMBL:CDM64963.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_2504_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1696..1920)
DNA (225bp) protein (75aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX9_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM64962.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2504_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1917..2660)
DNA (744bp) protein (248aa)
ABC-type antimicrobial peptide transport system, ATPase component Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX8_CHLTF
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CDM64961.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
antimicrobial peptide ABC transporter ATPase
PLM2_5_b1_sep16_scaffold_2504_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2602..3738)
DNA (1137bp) protein (379aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64959.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_2504_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3847..4140)
DNA (294bp) protein (98aa)
Caa(3)-type oxidase, subunit IV Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCH6_THET1
caa(3)-type oxidase, subunit IV
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM2_5_b1_sep16_scaffold_2504_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4184..5074)
DNA (891bp) protein (297aa)
Cytochrome oxidase subunit III Tax=Blastopirellula marina DSM 3645 RepID=A4A0M6_9PLAN
Cytochrome oxidase subunit III {ECO:0000313|EMBL:EAQ77692.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
cytochrome C oxidase subunit III
PLM2_5_b1_sep16_scaffold_2504_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5105..6775)
DNA (1671bp) protein (557aa)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:CDM66512.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDM66512.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BQ8_SOLUE
PLM2_5_b1_sep16_scaffold_2504_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6786..7877)
DNA (1092bp) protein (364aa)
Cytochrome c oxidase, subunit II {ECO:0000313|EMBL:CDM66513.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDM66513.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cytochrome c oxidase subunit 2 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BQ9_SOLUE
cytochrome c oxidase subunit II
PLM2_5_b1_sep16_scaffold_2504_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7914..8831)
DNA (918bp) protein (306aa)
Electron transport protein SCO1/SenC Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BR0_SOLUE
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:CDM66514.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
electron transport protein SCO1/SenC
PLM2_5_b1_sep16_scaffold_2504_11
unknown

Not on your lists

comp(8846..9385)
DNA (540bp) protein (180aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2504_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(9424..10647)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BR2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81504.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM2_5_b1_sep16_scaffold_2504_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10647..11348)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XE55_9BACT
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit {ECO:0000313|EMBL:CDM66517.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
PLM2_5_b1_sep16_scaffold_2504_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11335..11844)
DNA (510bp) protein (170aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BR4_SOLUE
Quinol:cytochrome c oxidoreductase membrane protein {ECO:0000313|EMBL:CDM66518.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2504_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11902..12492)
DNA (591bp) protein (197aa)
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1 {ECO:0000313|EMBL:CDM66519.1}; EC=1.2.7.- {ECO:0000313|EMBL:CDM66519.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
polysulphide reductase, NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] bin=CNBR_ACIDO species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polysulfide reductase NrfD
Displaying 15 items

View Taxonomy