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PLM2_5_b1_sep16_scaffold_10893

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_10893_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2..268)
DNA (267bp) protein (89aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDM65929.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CDM65929.1};; EC=6.3.2.5 {ECO:0000313|EMBL:CDM65929.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphopantothenoylcysteine decarboxylase Tax=[Streptococcus] pleomorphus RepID=UPI0003B74025
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
PLM2_5_b1_sep16_scaffold_10893_2
unknown

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338..1048
DNA (711bp) protein (237aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_10893_3
unknown

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1058..1759
DNA (702bp) protein (234aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_10893_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1797..2339
DNA (543bp) protein (181aa)
NTP pyrophosphohydrolase {ECO:0000313|EMBL:CDM66458.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CDM66458.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Nudix-type nucleoside diphosphatase, YffH/AdpP family Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N7A8_9FIRM
NUDIX hydrolase
PLM2_5_b1_sep16_scaffold_10893_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3097..3531
DNA (435bp) protein (145aa)
50S ribosomal protein L13 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL13_ACIC5
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rplM; 50S ribosomal protein L13
PLM2_5_b1_sep16_scaffold_10893_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3613..4005
DNA (393bp) protein (131aa)
30S ribosomal protein S9 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN9_CHLTF
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
30S ribosomal protein S9
PLM2_5_b1_sep16_scaffold_10893_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4167..5225
DNA (1059bp) protein (353aa)
30S ribosomal protein S2 Tax=Koribacter versatilis (strain Ellin345) RepID=RS2_KORVE
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rpsB; 30S ribosomal protein S2
PLM2_5_b1_sep16_scaffold_10893_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5317..5979
DNA (663bp) protein (221aa)
Elongation factor Ts Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNR8_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
translation elongation factor Ts
PLM2_5_b1_sep16_scaffold_10893_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6071..6787
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] bin=GWC2_NOV_55_46 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
pyrH; uridylate kinase (EC:2.7.4.22)
PLM2_5_b1_sep16_scaffold_10893_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6829..7350
DNA (522bp) protein (174aa)
Ribosome-recycling factor Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AL4_SOLUE
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribosome recycling factor
PLM2_5_b1_sep16_scaffold_10893_11
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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7443..10166
DNA (2724bp) protein (908aa)
hypothetical protein, partial Tax=Ideonella sp. B508-1 RepID=UPI0003B4164F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV80999.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
PLM2_5_b1_sep16_scaffold_10893_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10176..10916)
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65809.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_10893_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10925..11854)
DNA (930bp) protein (310aa)
Sigma E regulatory protein, MucB/RseB {ECO:0000313|EMBL:CDM65808.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_10893_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(11886..12809)
DNA (924bp) protein (308aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ATP-dependent DNA helicase, Rep family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029V8_SOLUE
ATP-dependent DNA helicase Rep
Displaying 14 items

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