ggKbase home page

PLM2_5_b1_sep16_scaffold_13189

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_13189_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1..660
DNA (660bp) protein (220aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00015246};; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase Tax=Solibacter usitatus (strain Ellin6076) RepID=AMPA_SOLUE
PLM2_5_b1_sep16_scaffold_13189_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

676..1890
DNA (1215bp) protein (405aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558, ECO:0000256|SAAS:SAAS00035312};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
malate--CoA ligase subunit beta Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003613BED
sucC; succinyl-CoA synthetase subunit beta
PLM2_5_b1_sep16_scaffold_13189_3
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1899..2420)
DNA (522bp) protein (174aa)
Putative metal-dependent hydrolase Deipe_3075 {ECO:0000256|HAMAP-Rule:MF_01256}; EC=3.-.-.- {ECO:0000256|HAMAP-Rule:MF_01256};; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
Putative metal-dependent hydrolase Deipe_3075 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A510_DEIPD
mycothiol maleylpyruvate isomerase domain-containing protein
PLM2_5_b1_sep16_scaffold_13189_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2437..3804)
DNA (1368bp) protein (456aa)
Primary replicative DNA helicase {ECO:0000313|EMBL:CDM64943.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CDM64943.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
primary replicative DNA helicase (EC:3.6.1.-)
DNA helicase Tax=Orenia marismortui RepID=UPI0003824590
PLM2_5_b1_sep16_scaffold_13189_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(3995..4687)
DNA (693bp) protein (231aa)
50S ribosomal protein L9 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA2_CHLTF
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L9
PLM2_5_b1_sep16_scaffold_13189_6
Amphibacillus xylanus, Amphibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(4746..5027)
DNA (282bp) protein (94aa)
30S ribosomal protein S18 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0J538_AMPXN
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Amphibacillus.;" source="Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG; 17667 / NBRC 15112 / Ep01).;"
PLM2_5_b1_sep16_scaffold_13189_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(5051..5425)
DNA (375bp) protein (125aa)
30S ribosomal protein S6 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA3_CHLTF
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
30S ribosomal protein S6
PLM2_5_b1_sep16_scaffold_13189_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5466..6029)
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=Solibacter usitatus (strain Ellin6076) RepID=PTH_SOLUE
PLM2_5_b1_sep16_scaffold_13189_9
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(6041..6403)
DNA (363bp) protein (121aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI000379733C
50S ribosomal protein L25, Ctc-form
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
Displaying 9 items

View Taxonomy