ggKbase home page

PLM2_5_b1_sep16_scaffold_5452

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_5452_1
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..524
DNA (522bp) protein (174aa)
Putative Glycosyl transferase, group 1 family protein bin=GWF2_Geobacter_54_21 species=Microcystis sp. T1-4 genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
glycoside hydrolase family protein
Tax=GWC2_Geobacteraceae_55_20_curated
PLM2_5_b1_sep16_scaffold_5452_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

623..1639
DNA (1017bp) protein (339aa)
glycosyl transferase, group 4 (EC:2.7.8.-)
hypothetical protein Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI0003809357
Tax=RBG_16_Chloroflexi_63_12_curated
PLM2_5_b1_sep16_scaffold_5452_3
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1650..2483
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=Nostoc sp. PCC 7107 RepID=K9QAJ5_9NOSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY42358.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
PLM2_5_b1_sep16_scaffold_5452_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

2626..3123
DNA (498bp) protein (166aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM2_5_b1_sep16_scaffold_5452_5
unknown

Not on your lists

3194..4096
DNA (903bp) protein (301aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_5452_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4080..4715
DNA (636bp) protein (212aa)
Universal bacterial protein YeaZ Tax=Stomatobaculum longum RepID=H1HVM3_9FIRM
Peptidase {ECO:0000313|EMBL:EWY40417.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative peptidase
PLM2_5_b1_sep16_scaffold_5452_7
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4717..5226
DNA (510bp) protein (170aa)
Putative ribosomal-protein-alanine acetyltransferase Tax=Photobacterium profundum 3TCK RepID=Q1Z349_PHOPR
Putative ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EAS42940.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum 3TCK.;"
ribosomal-protein-alanine acetyltransferase
PLM2_5_b1_sep16_scaffold_5452_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5330..5560
DNA (231bp) protein (77aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP38_KORVE
Uncharacterized protein {ECO:0000313|EMBL:CDM64817.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_5452_9
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(5601..6731)
DNA (1131bp) protein (377aa)
WD40-like repeat-containing protein
Tax=RBG_13_OP8X_37_8_curated
PLM2_5_b1_sep16_scaffold_5452_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6860..7342
DNA (483bp) protein (161aa)
Single-stranded DNA-binding protein Tax=uncultured bacterium F39-01 RepID=I3VIC6_9BACT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
single-stranded DNA-binding protein
PLM2_5_b1_sep16_scaffold_5452_11
unknown

Not on your lists

7693..8310
DNA (618bp) protein (206aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_5452_12
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(8324..9133)
DNA (810bp) protein (270aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=uncultured bacterium F39-01 RepID=I3VIC7_9BACT
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Displaying 12 items

View Taxonomy