ggKbase home page

PLM2_5_b1_sep16_scaffold_5621

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_5621_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RU2_SOLUE
PLM2_5_b1_sep16_scaffold_5621_2
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(281..763)
DNA (483bp) protein (161aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI0003708D0E
N-acetyltransferase GCN5
Tax=GWA2_Bacteroidetes_30_7_curated
PLM2_5_b1_sep16_scaffold_5621_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(853..2946)
DNA (2094bp) protein (698aa)
Putative metalloendopeptidase Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WS99_9GAMM
Peptidase M13 {ECO:0000313|EMBL:GAN45175.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative metalloendopeptidase
PLM2_5_b1_sep16_scaffold_5621_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3000..3404)
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM67105.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM2_5_b1_sep16_scaffold_5621_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3674..5893
DNA (2220bp) protein (740aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40069.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM2_5_b1_sep16_scaffold_5621_6
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6169..8541
DNA (2373bp) protein (791aa)
Uncharacterized protein Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KSS1_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST35162.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_5621_7

Not on your lists

comp(8612..9085)
DNA (474bp) protein (158aa)
TonB family C-terminal domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE2_CHLTF
Gram-negative bacterial tonB protein {ECO:0000313|EMBL:AIA17216.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TonB family C-terminal domain-containing protein
Displaying 7 items

View Taxonomy