ggKbase home page

PLM2_5_b1_sep16_scaffold_159199

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_159199_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3..956)
DNA (954bp) protein (318aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CDM66430.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CDM66430.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase Tax=uncultured Acidobacteria bacterium RepID=H5SH83_9BACT
PLM2_5_b1_sep16_scaffold_159199_2
unknown

Not on your lists

comp(968..1261)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_159199_3
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1264..1743)
DNA (480bp) protein (160aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase Tax=Lautropia mirabilis ATCC 51599 RepID=E7RU01_9BURK
membrane protein
PLM2_5_b1_sep16_scaffold_159199_4
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1744..2004)
DNA (261bp) protein (87aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002EC9414
DNA-3-methyladenine glycosylase
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:AIF46234.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
PLM2_5_b1_sep16_scaffold_159199_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2018..2293)
DNA (276bp) protein (92aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000364EACF
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:ETW95874.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM2_5_b1_sep16_scaffold_159199_6
unknown

Not on your lists

comp(2290..2718)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_159199_7
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2730..3290)
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z8R1_BELBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL85629.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
PLM2_5_b1_sep16_scaffold_159199_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3366..3518)
DNA (153bp) protein (51aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2G3_ACISM
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADW69187.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM2_5_b1_sep16_scaffold_159199_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3542..4240)
DNA (699bp) protein (233aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM66429.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CDM66429.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHG1_CHLTF
Displaying 9 items

View Taxonomy