ggKbase home page

PLM2_5_b1_sep16_scaffold_6504_2

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1074..1799)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase S54, rhomboid domain bin=GWF2_Ignavibacteria_35_20 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 243.0
  • Bit_score: 255
  • Evalue 3.10e-65
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 241.0
  • Bit_score: 238
  • Evalue 1.10e-60
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 243.0
  • Bit_score: 273
  • Evalue 1.50e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Ignavibacteria_36_8_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 726
ATGTTTCCGATCGGCGACGACGATTCAGACAGGCACATTCAGCCGATAGTCAATTACGCGATCATTGGCATCAACATTCTTGTTTTCTTGCTGCTGCAGCAGCTTGGCAGCAACGAACATTTTACCTACGCATTTTCTCTGGTTCCCAAAGAGATAACCACCGGCATCGATATAACCGGCGTGCAGGTCGTGCGGGATTCGCTGGGGCACACCGGCGAGATCCACCATTATCCAACTCCACTTCCGGTGTATTTCAACTTTCTCAGCTCGATGTTCATGCACGGCGGGATAATGCATATTTTTGGGAATATGCTGTTCCTCTTTATCTTTGGCGATAACCTCGAGAACGTCATAGGCCATATTCGATACGGCATCTTTTATCTTTTATGCGGAGTTGCGGCTGCTCTGGCGCAGATACTGATGGGCCCCGATTCGATAATACCGATGCTCGGGGCATCGGGTGCCATCTCGGGCGTTCTGGGCGGATACATTCTGCTGTTCCCAACGCGCCCCGTGCGGGCGATCATATTTAACATGATGACGACCGTGCCGTCTTTCGTAGCGATCGGTATCTGGATCGTTTATCAGGTGGTACTGGGATACTTTTCATCGGCCGAAAGCGGCGGTGTCGCCTATGCCGCACATATAGGCGGGTTTGTTGCCGGCCTTGCGCTGATCAAGCTTTTCGCGATCGGTACCACGACGACGGCGACAAGCCAACAATAA
PROTEIN sequence
Length: 242
MFPIGDDDSDRHIQPIVNYAIIGINILVFLLLQQLGSNEHFTYAFSLVPKEITTGIDITGVQVVRDSLGHTGEIHHYPTPLPVYFNFLSSMFMHGGIMHIFGNMLFLFIFGDNLENVIGHIRYGIFYLLCGVAAALAQILMGPDSIIPMLGASGAISGVLGGYILLFPTRPVRAIIFNMMTTVPSFVAIGIWIVYQVVLGYFSSAESGGVAYAAHIGGFVAGLALIKLFAIGTTTTATSQQ*