ggKbase home page

PLM2_5_b1_sep16_scaffold_6504_3

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1831..3285)

Top 3 Functional Annotations

Value Algorithm Source
Na+/H+ dicarboxylate symporter {ECO:0000313|EMBL:CDM66034.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 483.0
  • Bit_score: 594
  • Evalue 1.00e-166
Proton/sodium-glutamate symport protein bin=GWF2_Melioribacter_38_21 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 449.0
  • Bit_score: 402
  • Evalue 4.10e-109
sodium:dicarboxylate symporter similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 458.0
  • Bit_score: 374
  • Evalue 2.60e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGAGCGAACAGGACAAAGAAAAGTTCTCGGACGACCCTTACGATCGCGAAATGGCGACTGATCTTGACGATAAGACGTCCGACAAACCCAGGGGCATTGCTTTACATACCAAGATCCTGATCGGCCTCTTGGCCGGTGTGATCTCTGGCGTAATTGCGAACCAGTTGGGTAAATCGCTGGGTAAGGGCTTTAGCGATCAGGTGGATTGGACGATCGCTAATTTTACGGCACCGATAGGCACTCTATTTTTGAGCTTATTGTTGATGATCGTCGTTCCCCTGGTTTTTGCGTCTCTCGTCGTAGGGGTCGCCGGCATTGGAGATGTCCGGAAACTGGGGCGGGTAGGCTTGAGATCATTTGGATACTGTCTGGTGCTCTCGACAATTTCCGTGGCTATCGGCCTTGTCCTCGCTAATACCATACAGCCCGGTAAAAGGATCGACCCGGCGGTGGCTGCAAAGCTGCAAGACGATTACAAAACTCAGGCCGGATCCACCGTTAGCGAAGCCGAAAGATCAAAGCAGTCCGTAACCGATTCGCCGCTCATGCAGGTCGTGAAAACGGTTGTGCCTCGCAATTTTTTTGCCTCGGCTGTGGGCGACCTTAAGGTTGTGGTAAATCGTGACAGCGGCGAAGGCAGCGTAACCGGCATAAGCCCAAATATGTTGCACATAATGTTTTTTGCCTTGATAATTGGCATCGCCATAACGCTTCTGCCTGCTGAGGCCGGCAAGCCGTTTGTCAATGTGATGGAATCGCTGTTTGCGATCACGTCAAAGATCATCGACCTTATAATGAAATTTGCGCCATTTGCCGTGGCGTGTCTGATCTTTAACAATATTGCAAAGTTCGGGGCCGACCTATTGCTGCCGCTGGGGTGGTTTATCCTGACCGTGCTGCTTGGCCTCTCTATCCACTTTTTTGGGGTGTACTCACTCTCGGTTTGGCTGCTTTCAAAATTAAACCCCCTGGACTTTTTCCGCAGGGTGTGGACCGTCATAGTGACCGCGTTCTCCACGTCATCGTCAAATGCGACCTTGCCAACCGCCCTGCGGATCTCAGAAGAAAATCTGGGTGTACCGAAAGAAATAAACAGCTTTGTTCTGACGGTTGGGGCTACAGCAAATCAGAATGGAACAGCTCTCTATGAGGGAGTGACGGTCCTGTTTCTGGCGCAGATCTTCGGTTTGGACCTGACGATCTGGCAGCAGCTGATGGTCGTGTACCTGGCGATACTCGGCGGCATCGGAACGGCAGGCGTACCCAGCGGCTCGATACCCTTCATCGTTGGTATTTTGGCGATGATCGGCGTACCGCCTGCTTTAATAGCGATAATCCTGGGCGTCGATCGCATCCTTGATATGTGCCGAACGACTCTCAACGTTGTAGGCGATATTACGGCGGCGACCTATGTCGCCAGAAGCGAGGGGTATGAGTTACTAAGTACGAAATAA
PROTEIN sequence
Length: 485
MSEQDKEKFSDDPYDREMATDLDDKTSDKPRGIALHTKILIGLLAGVISGVIANQLGKSLGKGFSDQVDWTIANFTAPIGTLFLSLLLMIVVPLVFASLVVGVAGIGDVRKLGRVGLRSFGYCLVLSTISVAIGLVLANTIQPGKRIDPAVAAKLQDDYKTQAGSTVSEAERSKQSVTDSPLMQVVKTVVPRNFFASAVGDLKVVVNRDSGEGSVTGISPNMLHIMFFALIIGIAITLLPAEAGKPFVNVMESLFAITSKIIDLIMKFAPFAVACLIFNNIAKFGADLLLPLGWFILTVLLGLSIHFFGVYSLSVWLLSKLNPLDFFRRVWTVIVTAFSTSSSNATLPTALRISEENLGVPKEINSFVLTVGATANQNGTALYEGVTVLFLAQIFGLDLTIWQQLMVVYLAILGGIGTAGVPSGSIPFIVGILAMIGVPPALIAIILGVDRILDMCRTTLNVVGDITAATYVARSEGYELLSTK*