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PLM2_5_b1_sep16_scaffold_12112_3

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 1080..2576

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 497.0
  • Bit_score: 534
  • Evalue 1.00e-148
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 496.0
  • Bit_score: 426
  • Evalue 3.60e-116
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13) similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 496.0
  • Bit_score: 422
  • Evalue 1.10e-115

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1497
TTGAGTTTACACCAACATAAAATAGAGAAAATAGCGGCCCATCTGAACGCCAGTTTGTCTGGCGGCGGCGTGGGCGAGATAACGGGTGTCACGCATGATTCGCGCCAGGCACGCGGCGGGACACTGTTCGTGGCAATTAAAGGCGGGACAATGGATGGGCACCGCTTTATCTACGATGTAATGCGCCGCGGCGCCGCAGGCATTATATCCGAACAGGAGCGTCCGGCCGATTTTACTGGCGCCTGGCTACAAGTCGCCGACGCTCGTATCGCTTTGGCAAAAGCCGCCGTTCTCGTAAACGACCACCCGTCGCACGACCTTGCTCTTGTCGGTATCACCGGCACTAATGGTAAGACCACAACAACCTATCTTTGCTTTGCCCTTGCCCAAGCGGCAGGTGTTAAGCCGGCAATGTTGACGACGGTGGAGTACCGCATCGGCGACAAGAGCGAACCTGCCGTGCGGACCACGCCTGAGGCGTCCGATACCAATAAGTTCTTACGCCAGGCCGTAGACGAGGGCTGCAAGATCGGGGTAATGGAAGCTTCGTCCCAGGCCATCGACCTGCACCGTTGTGACGGGCTGCGGTTCAAAGTTGTTATCTTTACCAATCTGACCCGCGATCACCTTGATTACCATCTGACGATGGAAAATTATTTCGACGCCAAAAAGAAGCTGTTCGACGGCCGTCTCGGTGAAGCGCCTGGCTCAAGCATTATAAATATCGATGATGAGTGGGGATCATCTCTTGCAAATGAATTAAGAGATCGCGGACAACGCGTCCTGACTACATCGCTCGTAAGTGATGCCGATCTCACTGCTTCAAATATCGAGGTCTCACTGGTTCGGGGAACTTCTTTTCTATTGACCTCACCTGCGGGCACGGCCGATATCAGGTCGCCTCTAGTTGGCAAGCCTCATGTTTACAACATGCTTTCGGCCACAGGGGCCGCCCTGGAGCTTGGATTCAGCCTCGACAATATAACTGAAGGCGTTTCGACTTGCATCGGTGCCCCGGGGCGTTTTGAGCGGGTGCCGCATGATGGCGATTTTGCTGTCGTCGTTGATTATGCGCATACCGATGACGCGCTCTTGAACACGCTTAAGACCGCCCGCGAATTAACCGAGGGCCGGATCATCACCGTTTTTGGCTGCGGAGGCGATCGGGATCGTTCAAAACGCAGGCCGATGGGCGAAATCGCCGGGAAATATAGTGATCTTGTGATCGCTACTTCTGATAATCCCAGAAACGAAGACCCGTTAAAGATCATTTCGGAGATAACGTCGGGCATAAGCGATACAAACACGCCATTCCAGGTAGTTCCGGACCGGCGAGAAGCTATTCAGCGGGCGATACTGGGTGCAAAAACTGGTGACGTTGTGATCATTGCTGGTAAGGGGCATGAAACCTACCAGATCATCGGCCAGGACAAGTTTCACTTTGACGACCAGAAGGTGGCGGCCGAGGCCCTCGCAAGGATCAGAGAAGAGGCCTAG
PROTEIN sequence
Length: 499
LSLHQHKIEKIAAHLNASLSGGGVGEITGVTHDSRQARGGTLFVAIKGGTMDGHRFIYDVMRRGAAGIISEQERPADFTGAWLQVADARIALAKAAVLVNDHPSHDLALVGITGTNGKTTTTYLCFALAQAAGVKPAMLTTVEYRIGDKSEPAVRTTPEASDTNKFLRQAVDEGCKIGVMEASSQAIDLHRCDGLRFKVVIFTNLTRDHLDYHLTMENYFDAKKKLFDGRLGEAPGSSIINIDDEWGSSLANELRDRGQRVLTTSLVSDADLTASNIEVSLVRGTSFLLTSPAGTADIRSPLVGKPHVYNMLSATGAALELGFSLDNITEGVSTCIGAPGRFERVPHDGDFAVVVDYAHTDDALLNTLKTARELTEGRIITVFGCGGDRDRSKRRPMGEIAGKYSDLVIATSDNPRNEDPLKIISEITSGISDTNTPFQVVPDRREAIQRAILGAKTGDVVIIAGKGHETYQIIGQDKFHFDDQKVAAEALARIREEA*