ggKbase home page

PLM2_5_b1_sep16_scaffold_18011_8

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(5095..5271)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Fluoribacter dumoffii RepID=UPI00026C7942 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 54.0
  • Bit_score: 95
  • Evalue 9.90e-18
Plasmid stabilization system protein {ECO:0000313|EMBL:CEA02109.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 54.0
  • Bit_score: 93
  • Evalue 6.90e-17
termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 55.0
  • Bit_score: 92
  • Evalue 2.40e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 177
ATGCCAGGAACAAAATACACAAAAAAACAGGAACGAAAGGCTGACCATATCGAGAAAAGTTACGAGAAAAAAGGTGTTTCGAAAAAAGAGGCCGAGAGCCGTGCCTGGGCGACGGTAAATAAACAGGACGGCGGCGGCAAAAAGAAAGGCGGCTCAGGCCGCAAGAAATCGCATTAA
PROTEIN sequence
Length: 59
MPGTKYTKKQERKADHIEKSYEKKGVSKKEAESRAWATVNKQDGGGKKKGGSGRKKSH*