ggKbase home page

PLM2_5_b1_sep16_scaffold_18011

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_18011_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

2..376
DNA (375bp) protein (125aa)
hypothetical protein Tax=Methylopila sp. M107 RepID=UPI00035D739A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE83876.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM2_5_b1_sep16_scaffold_18011_2
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(440..1162)
DNA (723bp) protein (241aa)
chrC; Superoxide dismutase [Fe] (EC:1.15.1.1)
Iron/manganese superoxide dismutase, C-terminal domain Tax=uncultured organism RepID=T1W7Y7_9ZZZZ
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
PLM2_5_b1_sep16_scaffold_18011_3
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1207..2721)
DNA (1515bp) protein (505aa)
Uncharacterized protein Tax=Asticcacaulis sp. YBE204 RepID=V4NS13_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ78736.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
PAS/PAC sensor signal transduction histidine kinase
PLM2_5_b1_sep16_scaffold_18011_4
unknown

Not on your lists

comp(2978..3256)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_5
unknown

Not on your lists

comp(3407..3679)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_6
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4090..4803
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9KUE4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:AKH37228.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_18011_7
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4825..5013
DNA (189bp) protein (63aa)
Uncharacterized protein Tax=Escherichia coli KTE75 RepID=L3QJ47_ECOLX
hypothetical protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
PLM2_5_b1_sep16_scaffold_18011_8
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5095..5271)
DNA (177bp) protein (59aa)
transcriptional regulator Tax=Fluoribacter dumoffii RepID=UPI00026C7942
Plasmid stabilization system protein {ECO:0000313|EMBL:CEA02109.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;"
termination factor Rho
PLM2_5_b1_sep16_scaffold_18011_9
unknown

Not on your lists

5404..5697
DNA (294bp) protein (98aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6622..7032
DNA (411bp) protein (137aa)
MerR family transcriptional regulator Tax=Xanthomonas sp. SHU199 RepID=UPI00036E828B
Predicted transcriptional regulator {ECO:0000313|EMBL:CDM66544.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
MerR family transcriptional regulator
PLM2_5_b1_sep16_scaffold_18011_11
unknown

Not on your lists

7181..7564
DNA (384bp) protein (128aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_12
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7644..8366
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L729_9GAMM
PAS sensor protein
Uncharacterized protein {ECO:0000313|EMBL:EPC00521.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
PLM2_5_b1_sep16_scaffold_18011_13
unknown

Not on your lists

8638..8883
DNA (246bp) protein (82aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_14
unknown

Not on your lists

comp(8977..9210)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_15
unknown

Not on your lists

9278..9760
DNA (483bp) protein (161aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9767..10399
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM2_5_b1_sep16_scaffold_18011_17
unknown

Not on your lists

10412..10858
DNA (447bp) protein (149aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_18011_18
unknown

Not on your lists

comp(11043..11270)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 18 items

View Taxonomy