ggKbase home page

PLM2_5_b1_sep16_scaffold_65933_3

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 1584..2333

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:CDM66206.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 232.0
  • Bit_score: 184
  • Evalue 9.70e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGATCAAGATCAACCTATTAAATTCTGTAACTGAGAGACAAACCGGCACGGTCATAGCGGTCGATCGAAAGATATCGAGTGCTGGATCACGGCTAGCTTTAACGACCATCGTCGTTACCCTTTTGCTGGGAACCGTCATTGCATGGGATGTCATCAGCACCCAAATGGCGAGAACCGAAGCCGAGCGGCAACTCGATGAGCAGAAGCGGATCGCCGCAGAGCTCGAGGTCGTGATGAACGAGCAAAAGGAACTCGAGGAAAAGATCGCGAGTATAGATGGCCGTATCGATGCCATCAAGAAACTTCGCTCGACACAGGCCGGCCCCAGCGCCGTGCTTGAGGCCATGCGTGAGCGCATACAGATGGTTCCGGGACTATATATAGAGAGCATCGAGCAGACCGGTGACAGCCTCATCGTCAAGGGCAATTCGCCTGACGAGGCACAGGTAACGCAGTTTGGCCGCAGCCTCGAGTTTTCTAATGGATTGTTCTCAAACCTGAACATCGAAACGGTCAGGGCCGAAATAACGGATCAGAATGCGGCTGTTAAGGTAAACGAAAAAGGTGAGTCGGTCGCCCCCAAGGTGGAGATCGTAAATTTCACGATCAAGTGTGCTTATACAGCCTCAAAGGCGGTAAATCCAGATGCGAATGCGACAACCGCTTCGGTCCAGGGACCAGCTAATCCGGCAGCGGGCAATCCGGCCGCAGTTAGCCCGGCGGCGGCAACCCAGGTAGCAAAGAACTAA
PROTEIN sequence
Length: 250
MIKINLLNSVTERQTGTVIAVDRKISSAGSRLALTTIVVTLLLGTVIAWDVISTQMARTEAERQLDEQKRIAAELEVVMNEQKELEEKIASIDGRIDAIKKLRSTQAGPSAVLEAMRERIQMVPGLYIESIEQTGDSLIVKGNSPDEAQVTQFGRSLEFSNGLFSNLNIETVRAEITDQNAAVKVNEKGESVAPKVEIVNFTIKCAYTASKAVNPDANATTASVQGPANPAAGNPAAVSPAAATQVAKN*