ggKbase home page

PLM2_5_b1_sep16_scaffold_65933_4

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2366..3049

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein PilO {ECO:0000313|EMBL:CDM66207.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 209.0
  • Bit_score: 165
  • Evalue 7.30e-38
Pilus assembly protein PilO bin=GWC2_Methylomirabilis_70_24 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 31.7
  • Coverage: 218.0
  • Bit_score: 102
  • Evalue 5.40e-19
pilus assembly protein, PilO similarity KEGG
DB: KEGG
  • Identity: 24.6
  • Coverage: 179.0
  • Bit_score: 78
  • Evalue 2.40e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGTTAGAGAAAATAAAAAATCTTAAGTGGCACGTTCAGCTGATGCTGCTTGTCGGCGTGGCTGCCCTGCTGTACGCGGGCGTGTGGTACTTCGTGACCGCCGATATGCGAGCCGAGGTCGCCAAGTTGAATGACGAGGTCGCCGCGCAGCTGCAAAAGAACGAGGCTGCTCGCATGGCCACCCAGCACATTAACGAATTTCGAGCTCTGTACGCCAGCAAATCCGAAGAGTACGAAGAGTTAAAGGTACTTCTCCCGGAACAGAGAGAGATAACCAACGTACTCCAGGGATTGCAGGACACCGCGAATAACAGCCGGCTGATGGTCATGCGATTTGCACCGCGTGACGACACGCAGCAGGATGTGATCCTGGCAAAGCCCGTCGAGGTCGAGGTGGACAGCAATTTCAATAACCTTCGCGAGTTTTTTGATCGCATGGCAAAACTGCCGCGAATCGTGTCTATCACAGATTTCAAGATCAATCAGCTCGACAAGCAGACCGACGCCAAGACGCTGCATGCTCAATTCCTGCTAACGGCATATTACGCGGCCCCCACCGATCTCAACCCTAAGCCGGTTGCCAAACCCGGCGCACCTGGCGCACCTGGCGCGGCTCCGGCCGCCGGCCAACCCGCCGCTCCCGCAGCAGGCCAGCCCGCAGCACCTGCTCCGGTTGCAAAATAA
PROTEIN sequence
Length: 228
MLEKIKNLKWHVQLMLLVGVAALLYAGVWYFVTADMRAEVAKLNDEVAAQLQKNEAARMATQHINEFRALYASKSEEYEELKVLLPEQREITNVLQGLQDTANNSRLMVMRFAPRDDTQQDVILAKPVEVEVDSNFNNLREFFDRMAKLPRIVSITDFKINQLDKQTDAKTLHAQFLLTAYYAAPTDLNPKPVAKPGAPGAPGAAPAAGQPAAPAAGQPAAPAPVAK*