ggKbase home page

PLM2_5_b1_sep16_scaffold_7320

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_7320_1
Streptomyces sp. FR1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64..1098)
DNA (1035bp) protein (345aa)
PREDICTED: ice-structuring glycoprotein-like Tax=Musca domestica RepID=UPI0003C35DCA
Putative AfsR-like-like transcriptional regulator {ECO:0000313|EMBL:AHE38858.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. FR1.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_7320_2
unknown

Not on your lists

1210..1992
DNA (783bp) protein (261aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_7320_3
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1884..2198)
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCX3_GEOOG
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:KGH45874.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
PLM2_5_b1_sep16_scaffold_7320_4
unknown

Not on your lists

2291..2404
DNA (114bp) protein (38aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_7320_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2413..3438
DNA (1026bp) protein (342aa)
HrcA family transcriptional regulator Tax=Streptomyces violaceoniger RepID=UPI0003C73CA2
heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM2_5_b1_sep16_scaffold_7320_6
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3382..4386)
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MRY9_9ACTO
Membrane protein {ECO:0000313|EMBL:KEG38777.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_7320_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4489..4959)
DNA (471bp) protein (157aa)
Transcriptional regulator, MarR family Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8Z7_GEOOG
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB73640.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM2_5_b1_sep16_scaffold_7320_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5030..5545
DNA (516bp) protein (172aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0X4_STRRD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACZ83381.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM2_5_b1_sep16_scaffold_7320_9
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5612..6742
DNA (1131bp) protein (377aa)
Chaperone protein DnaJ Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RM86_BLASD
dnaJ; chaperone Hsp40, co-chaperone with DnaK
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_7320_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6739..7473
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Ribosomal RNA small subunit methyltransferase E Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0UYC3_9PSEU
ribosomal RNA small subunit methyltransferase E
PLM2_5_b1_sep16_scaffold_7320_11
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7502..8302)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00036EA350
Uncharacterized protein {ECO:0000313|EMBL:EST26512.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_7320_12
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8299..8523)
DNA (225bp) protein (75aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000362ED10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI08691.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
Displaying 12 items

View Taxonomy