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PLM2_5_b1_sep16_scaffold_7939

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_7939_1
unknown

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comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_7939_2
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(100..1233)
DNA (1134bp) protein (378aa)
DNA replication and repair protein RecF Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=RECF_SACEN
recF; recombination protein F
DNA replication and repair protein RecF {ECO:0000255|HAMAP-Rule:MF_00365}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM2_5_b1_sep16_scaffold_7939_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1240..2238)
DNA (999bp) protein (333aa)
6-phosphogluconate dehydrogenase, decarboxylating Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ADA2_THECD
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:ACY95612.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM2_5_b1_sep16_scaffold_7939_4
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2254..3375)
DNA (1122bp) protein (374aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta Tax=Frankia sp. Iso899 RepID=UPI0003B76097
PLM2_5_b1_sep16_scaffold_7939_5
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3748..5190)
DNA (1443bp) protein (481aa)
Chromosomal replication initiator protein DnaA Tax=Frankia RepID=F8B073_FRADG
chromosomal replication initiator protein dnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM2_5_b1_sep16_scaffold_7939_6
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5547..5684
DNA (138bp) protein (46aa)
50S ribosomal protein L34 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B072_FRADG
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM2_5_b1_sep16_scaffold_7939_7
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5702..6067
DNA (366bp) protein (122aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
Ribonuclease P protein component Tax=Streptomyces gancidicus BKS 13-15 RepID=M3DZW8_9ACTO
rnpA, StH24.03; ribonuclease P component
PLM2_5_b1_sep16_scaffold_7939_8
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6064..6453
DNA (390bp) protein (130aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI000362570C
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_7939_9
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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6447..7907
DNA (1461bp) protein (487aa)
Preprotein translocase subunit YidC Tax=Modestobacter marinus (strain BC501) RepID=I4F5P8_MODMB
Membrane protein insertase YidC {ECO:0000313|EMBL:KGH48463.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
oxaA; preprotein translocase subunit YidC
Displaying 9 items

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