ggKbase home page

PLM2_5_b1_sep16_scaffold_12349

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_12349_1
unknown

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_12349_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

191..1111
DNA (921bp) protein (307aa)
Cation diffusion facilitator family transporter Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL97_PSEUX
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEA25939.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM2_5_b1_sep16_scaffold_12349_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1138..1500
DNA (363bp) protein (121aa)
Putative membrane protein Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3JXX8_PSEFS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_12349_4
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1540..2070)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Nocardia asteroides NBRC 15531 RepID=U5EBI8_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:GAJ85660.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_12349_5
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2116..3072
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Rhodococcus sp. AW25M09 RepID=L8DDH3_9NOCA
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AJW42330.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
PLM2_5_b1_sep16_scaffold_12349_6
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3056..4084)
DNA (1029bp) protein (343aa)
adenosine deaminase 3 (EC:3.5.4.4)
Putative adenosine deaminase 3 (Adenosine aminohydrolase 3) {ECO:0000313|EMBL:CAJ60129.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CAJ60129.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Putative adenosine deaminase 3 (Adenosine aminohydrolase 3) Tax=Frankia alni (strain ACN14a) RepID=Q0RQP4_FRAAA
PLM2_5_b1_sep16_scaffold_12349_7
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4103..4456)
DNA (354bp) protein (118aa)
YCII-related Tax=Micromonospora lupini str. Lupac 08 RepID=I0L0L1_9ACTO
YCII-related protein {ECO:0000313|EMBL:CCH75871.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
ycii-like protein
PLM2_5_b1_sep16_scaffold_12349_8
unknown

Not on your lists

4546..4821
DNA (276bp) protein (92aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_12349_9
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4832..6478)
DNA (1647bp) protein (549aa)
pgi; glucose-6-phosphate isomerase 1 (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Glucose-6-phosphate isomerase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RW38_BLASD
Displaying 9 items

View Taxonomy