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PLM2_5_b1_sep16_scaffold_3406

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_3406_1
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..258
DNA (258bp) protein (86aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
DNA-directed RNA polymerase subunit alpha Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AV05_FRADG
DNA-directed RNA polymerase subunit alpha
PLM2_5_b1_sep16_scaffold_3406_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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290..1021
DNA (732bp) protein (244aa)
50S ribosomal protein L17 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH74_GEOOG
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM2_5_b1_sep16_scaffold_3406_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1023..1877
DNA (855bp) protein (285aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
tRNA pseudouridine synthase A Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WLZ4_ACTMD
hypothetical protein
PLM2_5_b1_sep16_scaffold_3406_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1903..2661)
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4EV22_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH87235.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_3406_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2696..3562)
DNA (867bp) protein (289aa)
ABC transporter Tax=Modestobacter marinus (strain BC501) RepID=I4EV21_MODMB
ABC transporter
ABC transporter {ECO:0000313|EMBL:CCH87234.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_3406_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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3714..4826
DNA (1113bp) protein (371aa)
Two component signal transduction histidine kinase Tax=Modestobacter marinus (strain BC501) RepID=I4EV20_MODMB
two component signal transduction histidine kinase
Two component signal transduction histidine kinase {ECO:0000313|EMBL:CCH87233.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_3406_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4823..5482
DNA (660bp) protein (220aa)
Two-component signal transduction response regulator Tax=Modestobacter marinus (strain BC501) RepID=I4EV19_MODMB
two-component signal transduction response regulator
Two-component signal transduction response regulator {ECO:0000313|EMBL:CCH87232.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_3406_8
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5512..6075
DNA (564bp) protein (188aa)
Formate dehydrogenase alpha subunit, selenocysteine-containing protein Tax=Amycolatopsis mediterranei RepID=I7DKG9_AMYMS
Dehydrogenase {ECO:0000313|EMBL:KDN19096.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
formate dehydrogenase alpha subunit, selenocysteine-containing protein
PLM2_5_b1_sep16_scaffold_3406_9
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6172..8817
DNA (2646bp) protein (882aa)
formate dehydrogenase subunit alpha Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627939
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:EHR60996.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
formate dehydrogenase alpha subunit, selenocysteine-containing protein
PLM2_5_b1_sep16_scaffold_3406_10
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8810..9709
DNA (900bp) protein (300aa)
Fe-S-cluster-containing hydrogenase, HybA Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HKA4_MYCMM
hybA; Fe-S-cluster-containing hydrogenase, HybA
Fe-S-cluster-containing hydrogenase, HybA {ECO:0000313|EMBL:ACC43601.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
PLM2_5_b1_sep16_scaffold_3406_11
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9706..10698
DNA (993bp) protein (331aa)
Formate-dependent nitrite reductase, membrane component, NrfD Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HKA5_MYCMM
nrfD; formate-dependent nitrite reductase, membrane component, NrfD
Formate-dependent nitrite reductase, membrane component, NrfD {ECO:0000313|EMBL:ACC43602.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
PLM2_5_b1_sep16_scaffold_3406_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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10818..11087
DNA (270bp) protein (90aa)
Serine/threonine protein kinase Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9L0H9_STRCO
hypothetical protein
Peptidase {ECO:0000313|EMBL:KHD74517.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
Displaying 12 items

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