ggKbase home page

PLM2_5_b1_sep16_scaffold_3754

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_3754_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1258)
DNA (1257bp) protein (419aa)
Radical SAM domain protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JT81_SACES
Radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:AHH94975.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM2_5_b1_sep16_scaffold_3754_2
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1287..2465)
DNA (1179bp) protein (393aa)
Rod shape-determining protein RodA Tax=Frankia sp. CN3 RepID=G6HL00_9ACTO
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AEH08988.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM2_5_b1_sep16_scaffold_3754_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2557..4653)
DNA (2097bp) protein (699aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ACZ89966.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACZ89966.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
peptidoglycan glycosyltransferase Tax=Frankia sp. Iso899 RepID=UPI0003B5EEDE
PLM2_5_b1_sep16_scaffold_3754_4
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4650..5147)
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD Tax=Streptomyces sp. HPH0547 RepID=S3B7M8_9ACTO
rod shape-determining protein
Rod shape-determining protein {ECO:0000313|EMBL:AJT67087.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM2_5_b1_sep16_scaffold_3754_5
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5144..6022)
DNA (879bp) protein (293aa)
Cell shape-determining protein MreC Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NB46_KITSK
mreC; putative rod shape-determining protein
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM2_5_b1_sep16_scaffold_3754_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6039..7085)
DNA (1047bp) protein (349aa)
Cell shape determining protein, MreB/Mrl family Tax=Frankia sp. (strain EuI1c) RepID=E3ITW0_FRASU
MreB/Mrl family cell shape determining protein
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ADP80007.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM2_5_b1_sep16_scaffold_3754_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7155..7979)
DNA (825bp) protein (275aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter
Tax=GWC2_RIF_CHLX_73_18_curated
PLM2_5_b1_sep16_scaffold_3754_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7981..8763)
DNA (783bp) protein (261aa)
ABC-type multidrug transport system, permease component Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLE6_BLASD
multidrug ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_3754_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8763..9701)
DNA (939bp) protein (313aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036CFD37
ABC transporter
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM2_5_b1_sep16_scaffold_3754_10
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9805..10215)
DNA (411bp) protein (137aa)
ndk; nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P kinase) (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Nucleoside diphosphate kinase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLE4_BLASD
PLM2_5_b1_sep16_scaffold_3754_11
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10288..10671)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCR7_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:KGH45911.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
Displaying 11 items

View Taxonomy