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PLM2_5_b1_sep16_scaffold_3802

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_3802_1
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(97..1014)
DNA (918bp) protein (306aa)
preprotein translocase subunit TatC Tax=Frankia sp. Iso899 RepID=UPI0003B31FF0
Sec-independent protein secretion pathway component TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM2_5_b1_sep16_scaffold_3802_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1028..1321)
DNA (294bp) protein (98aa)
Sec-independent protein translocase protein TatA Tax=Frankia sp. (strain EuI1c) RepID=E3J2T8_FRASU
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
twin-arginine translocation protein, TatA/E family subunit
PLM2_5_b1_sep16_scaffold_3802_3
unknown

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comp(1412..1600)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_3802_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1650..2597)
DNA (948bp) protein (316aa)
Transcriptional regulator Tax=Modestobacter marinus (strain BC501) RepID=I4EXC6_MODMB
pafC; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCH88039.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_3802_5
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2594..3781)
DNA (1188bp) protein (396aa)
Protein pafB Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJ02_BLASD
pafB; protein pafB
Protein pafB {ECO:0000313|EMBL:CCG03544.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_3802_6
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(3886..5244)
DNA (1359bp) protein (453aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Pup--protein ligase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YBI1_THEBD
hypothetical protein
PLM2_5_b1_sep16_scaffold_3802_7
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5281..5694
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Rhodococcus triatomae BKS 15-14 RepID=M2V8U9_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KFD43073.1}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3802_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(5711..6493)
DNA (783bp) protein (261aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PrcA {ECO:0000256|HAMAP-Rule:MF_00289}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
proteasome subunit alpha Tax=Frankia sp. Iso899 RepID=UPI0003B3B66F
prcA; 20S proteasome alpha subunit
PLM2_5_b1_sep16_scaffold_3802_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6513..7343)
DNA (831bp) protein (277aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PrcB {ECO:0000256|HAMAP-Rule:MF_02113}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Proteasome subunit beta Tax=Micromonospora sp. ATCC 39149 RepID=C4RMH5_9ACTO
20S proteasome a and b subunits
PLM2_5_b1_sep16_scaffold_3802_10
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7416..7628)
DNA (213bp) protein (71aa)
Prokaryotic ubiquitin-like protein Pup Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZM4_FRADG
ubiquitin-like protein pup
Ubiquitin-like protein pup {ECO:0000313|EMBL:AEH09627.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM2_5_b1_sep16_scaffold_3802_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7689..9206)
DNA (1518bp) protein (506aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A2S6_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY97874.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM2_5_b1_sep16_scaffold_3802_12
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9236..10024)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI000365CED9
Uncharacterized protein {ECO:0000313|EMBL:KDN19449.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3802_13
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(10204..10623)
DNA (420bp) protein (140aa)
vesicle-fusing ATPase (EC:3.6.4.6)
Proteasome-associated ATPase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=ARC_ACIC1
Proteasome-associated ATPase {ECO:0000255|HAMAP-Rule:MF_02112}; AAA ATPase forming ring-shaped complexes {ECO:0000255|HAMAP-Rule:MF_02112}; Short=ARC {ECO:0000255|HAMAP-Rule:MF_02112};; Proteasomal ATPase {ECO:0000255|HAMAP-Rule:MF_02112}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Displaying 13 items

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