ggKbase home page

PLM2_5_b1_sep16_scaffold_3994

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_3994_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98..439
DNA (342bp) protein (114aa)
ATP-dependent Clp protease adapter protein ClpS Tax=Micromonospora RepID=D9TD78_MICAI
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM2_5_b1_sep16_scaffold_3994_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

436..1026
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MGA8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK33875.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3994_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1061..2122
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037F09E6
amidase
Amidase {ECO:0000313|EMBL:ABQ67113.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
PLM2_5_b1_sep16_scaffold_3994_4
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2156..2749)
DNA (594bp) protein (198aa)
Putative uncharacterized protein Tax=Streptomyces sviceus ATCC 29083 RepID=B5HWZ3_9ACTO
Suppressor of fused protein (SUFU) {ECO:0000313|EMBL:KGN32060.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3994_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2791..3216
DNA (426bp) protein (142aa)
Mov34/MPN/PAD-1 family protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVK1_ACIC1
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:ABK53461.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM2_5_b1_sep16_scaffold_3994_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3271..3546
DNA (276bp) protein (92aa)
MoaD family protein {ECO:0000313|EMBL:EXG80108.1}; EC=2.8.1.12 {ECO:0000313|EMBL:EXG80108.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ThiamineS protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBE4_GEOOG
sulfur transfer protein ThiS
PLM2_5_b1_sep16_scaffold_3994_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3549..4496
DNA (948bp) protein (316aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000313|EMBL:ABK53459.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ABK53459.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Cysteine synthase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVJ9_ACIC1
PLM2_5_b1_sep16_scaffold_3994_8
unknown

Not on your lists

4614..4883
DNA (270bp) protein (90aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_3994_9
unknown

Not on your lists

comp(4968..5732)
DNA (765bp) protein (255aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_3994_10
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5729..6307)
DNA (579bp) protein (193aa)
siderophore-interacting protein Tax=Streptomyces sp. FxanaD5 RepID=UPI000367C1D1
Siderophore-interacting protein {ECO:0000313|EMBL:KEG43848.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
RNA polymerase sigma-E factor
PLM2_5_b1_sep16_scaffold_3994_11
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6381..7070)
DNA (690bp) protein (230aa)
hypothetical protein Tax=Streptomyces sp. AA1529 RepID=UPI0002E02C5D
Putative uncharacterized protein {ECO:0000313|EMBL:EFL28530.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3994_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7292..8410
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LD00_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH21697.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3994_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8397..10412
DNA (2016bp) protein (672aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Histidine kinase HAMP region domain protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SZJ3_MICAI
histidine kinase HAMP region domain-containing protein
Displaying 13 items

View Taxonomy