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PLM2_5_b1_sep16_scaffold_826

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_826_1
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1098)
DNA (1098bp) protein (366aa)
UPF0272 protein BLASA_0244 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RL93_BLASD
hypothetical protein
UPF0272 protein BLASA_0244 {ECO:0000256|HAMAP-Rule:MF_01074}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM2_5_b1_sep16_scaffold_826_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1095..1811)
DNA (717bp) protein (239aa)
Circadian phase modifier CpmA Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD29_NOCSJ
circadian phase modifier CpmA
Circadian phase modifier CpmA {ECO:0000313|EMBL:ABL79714.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM2_5_b1_sep16_scaffold_826_3
unknown

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comp(1833..2153)
DNA (321bp) protein (107aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_826_4
unknown

Not on your lists

comp(2606..2947)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_826_5
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3391..4473
DNA (1083bp) protein (361aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0FYT7_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK45397.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM2_5_b1_sep16_scaffold_826_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4470..6011
DNA (1542bp) protein (514aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3IYB8_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP83863.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM2_5_b1_sep16_scaffold_826_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6115..7032
DNA (918bp) protein (306aa)
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Prephenate dehydratase (EC:4.2.1.51)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035F86C6
PLM2_5_b1_sep16_scaffold_826_8
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7179..7625
DNA (447bp) protein (149aa)
Glyoxalase family protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SQJ0_9DELT
Glyoxalase family protein {ECO:0000313|EMBL:ERK91152.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
glyoxalase family protein
PLM2_5_b1_sep16_scaffold_826_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7635..8444
DNA (810bp) protein (270aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037B7840
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AIJ25682.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM2_5_b1_sep16_scaffold_826_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8520..10205
DNA (1686bp) protein (562aa)
TAP domain protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1Q1_KRIFD
TAP domain-containing protein
TAP domain protein {ECO:0000313|EMBL:ADB32040.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM2_5_b1_sep16_scaffold_826_11
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10236..10574)
DNA (339bp) protein (113aa)
chaperonin Tax=Frankia sp. Iso899 RepID=UPI0003B3773C
Co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|RuleBase:RU000535}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM2_5_b1_sep16_scaffold_826_12
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10588..10935)
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Saccharomonospora glauca K62 RepID=I1CWR8_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EIE97142.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_826_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11009..11734)
DNA (726bp) protein (242aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMN1_KORVE
Uncharacterized protein {ECO:0000313|EMBL:EWC62207.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_826_14
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11734..12315)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PU90_KRIFD
Uncharacterized protein {ECO:0000313|EMBL:ADB35141.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM2_5_b1_sep16_scaffold_826_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12329..14209)
DNA (1881bp) protein (627aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036645F6
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60724.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_826_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14493..15761
DNA (1269bp) protein (423aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CCG01236.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Serine--tRNA ligase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLA6_BLASD
PLM2_5_b1_sep16_scaffold_826_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15758..16561
DNA (804bp) protein (268aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003782817
Haloacid dehalogenase {ECO:0000313|EMBL:ETK34878.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
HAD-superfamily hydrolase
PLM2_5_b1_sep16_scaffold_826_18
unknown

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16585..17292
DNA (708bp) protein (236aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_826_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17289..17951)
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4Y0_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73091.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM2_5_b1_sep16_scaffold_826_20
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18024..19226
DNA (1203bp) protein (401aa)
csd; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLB2_BLASD
Cysteine desulfurase {ECO:0000313|EMBL:KGH44910.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
PLM2_5_b1_sep16_scaffold_826_21
unknown

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comp(19223..19297)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 21 items

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