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PLM2_5_b1_sep16_scaffold_4473

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_4473_1
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..291
DNA (291bp) protein (97aa)
Polyprenyl diphosphate synthase Tax=Streptomyces collinus Tu 365 RepID=S5VC59_STRCU
dimethylallyltranstransferase
Farnesyl diphosphate synthase {ECO:0000313|EMBL:BAP82196.1}; Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP04626.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cyaneogriseus subsp. noncyanogenus.;"
PLM2_5_b1_sep16_scaffold_4473_2
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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288..2309
DNA (2022bp) protein (674aa)
squalene-hopene cyclase Tax=Streptomyces sp. CNY243 RepID=UPI00036C1CDA
Squalene-hopene cyclase {ECO:0000313|EMBL:KDS87877.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
putative squalene--hopene cyclase
PLM2_5_b1_sep16_scaffold_4473_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2306..2896
DNA (591bp) protein (197aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI000379759C
PLM2_5_b1_sep16_scaffold_4473_4
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2893..3900
DNA (1008bp) protein (336aa)
Hopanoid biosynthesis associated radical SAM protein HpnH Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D100_PSEUX
Radical SAM domain protein {ECO:0000313|EMBL:CCH78276.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hopanoid biosynthesis associated radical SAM protein HpnH
PLM2_5_b1_sep16_scaffold_4473_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3919..4650)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00036E196C
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:AIJ24180.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM2_5_b1_sep16_scaffold_4473_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4677..5360)
DNA (684bp) protein (228aa)
Intracellular septation protein A Tax=Amycolatopsis methanolica RepID=UPI00036CCF82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24178.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM2_5_b1_sep16_scaffold_4473_7
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5686..6897)
DNA (1212bp) protein (404aa)
RNA polymerase subunit sigma-24 Tax=Actinopolymorpha alba RepID=UPI000365CAD2
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CCH19622.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_4473_8
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6910..7269)
DNA (360bp) protein (120aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035ECAA0
Sigma associated protein {ECO:0000313|EMBL:KGN28814.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
DGPFAETKE family protein
PLM2_5_b1_sep16_scaffold_4473_9
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7347..7760)
DNA (414bp) protein (138aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI00037EBD20
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG77448.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
PLM2_5_b1_sep16_scaffold_4473_10
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7883..9268
DNA (1386bp) protein (462aa)
Putative intramolecular lyase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C8A6_STRBB
putative intramolecular lyase
Putative intramolecular lyase {ECO:0000313|EMBL:AJC60082.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
PLM2_5_b1_sep16_scaffold_4473_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9359..9958)
DNA (600bp) protein (200aa)
Putative uncharacterized protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BXP3_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80926.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 11 items

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