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PLM2_5_b1_sep16_scaffold_4497

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_4497_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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3..1535
DNA (1533bp) protein (511aa)
transglycosylase (EC:3.2.-.-)
Putative transglycosylase {ECO:0000313|EMBL:CCH86399.1}; EC=3.2.-.- {ECO:0000313|EMBL:CCH86399.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Putative transglycosylase Tax=Modestobacter marinus (strain BC501) RepID=I4ESN6_MODMB
PLM2_5_b1_sep16_scaffold_4497_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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1594..2475
DNA (882bp) protein (294aa)
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000313|EMBL:CCH86400.1}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Ribosomal RNA small subunit methyltransferase A Tax=Modestobacter marinus (strain BC501) RepID=I4ESN7_MODMB
PLM2_5_b1_sep16_scaffold_4497_3
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2475..2819
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK35376.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein bin=bin8_Chloro species=Bradyrhizobium sp. genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_5_b1_sep16_scaffold_4497_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2816..4036
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003820E4D
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETK35375.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative ECF subfamily RNA polymerase sigma-24 subunit
PLM2_5_b1_sep16_scaffold_4497_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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4066..4560
DNA (495bp) protein (165aa)
Bifunctional deaminase-reductase domain protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QKD6_CATAD
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ACU75210.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM2_5_b1_sep16_scaffold_4497_6
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4596..5537
DNA (942bp) protein (314aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Rhodococcus sp. EsD8 RepID=N1M546_9NOCA
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
PLM2_5_b1_sep16_scaffold_4497_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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5534..7315
DNA (1782bp) protein (594aa)
glycerophosphoryl diester phosphodiesterase Tax=Frankia sp. Iso899 RepID=UPI0003B50C16
ABC transporters with duplicated ATPase domain
ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:CCH86039.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_4497_8
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7357..7767
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KJY38676.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
PLM2_5_b1_sep16_scaffold_4497_9
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7772..8371)
DNA (600bp) protein (200aa)
TetR family transcriptional regulator Tax=Streptomyces RepID=UPI00037C5F67
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:KDS85215.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
PLM2_5_b1_sep16_scaffold_4497_10
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8487..9455)
DNA (969bp) protein (323aa)
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
stearoyl-CoA desaturase Tax=Frankia sp. Iso899 RepID=UPI0003B3D58D
Fatty acid desaturase {ECO:0000313|EMBL:CCH78070.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
PLM2_5_b1_sep16_scaffold_4497_trna_1
unknown

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9640..9712
DNA (73bp)
transferRNA Gln
Displaying 11 items

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