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PLM2_5_b1_sep16_scaffold_2202

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2202_1
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..1506
DNA (1506bp) protein (502aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003637342
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ADG80215.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
PLM2_5_b1_sep16_scaffold_2202_2
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1487..1972)
DNA (486bp) protein (162aa)
GCN5-related N-acetyltransferase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SGD3_ACTS5
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEV84249.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM2_5_b1_sep16_scaffold_2202_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2074..4098
DNA (2025bp) protein (675aa)
Spermidine synthase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BEY9_STRRD
spermidine synthase-like protein
Spermidine synthase-like protein {ECO:0000313|EMBL:ACZ86350.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM2_5_b1_sep16_scaffold_2202_4
unknown

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comp(4075..5451)
DNA (1377bp) protein (459aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2202_5
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5531..7093
DNA (1563bp) protein (521aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XM38_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33917.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM2_5_b1_sep16_scaffold_2202_6
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7090..7842
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Aeromonas veronii RepID=F4D9H8_AERVB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ66885.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
PLM2_5_b1_sep16_scaffold_2202_7
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7852..8529)
DNA (678bp) protein (226aa)
B3/4 domain protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P175_STRVO
B3/4 domain-containing protein
B3/4 domain protein {ECO:0000313|EMBL:AEM87914.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM2_5_b1_sep16_scaffold_2202_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8623..9726
DNA (1104bp) protein (368aa)
Calcium/proton antiporter Tax=Micromonospora lupini str. Lupac 08 RepID=I0L3S8_9ACTO
Calcium/proton antiporter {ECO:0000313|EMBL:CCH18475.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
sodium/calcium exchanger membrane region
PLM2_5_b1_sep16_scaffold_2202_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9723..10301)
DNA (579bp) protein (193aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003728DE4
Uncharacterized protein {ECO:0000313|EMBL:CCH18796.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2202_10
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10620..10970)
DNA (351bp) protein (117aa)
ArsR family transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B696FD
HxlR family transcriptional regulator {ECO:0000313|EMBL:EME20065.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
SC9A4.04; hypothetical protein
PLM2_5_b1_sep16_scaffold_2202_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11051..11698
DNA (648bp) protein (216aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
FMN-dependent NADH-azoreductase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBX4_VERMA
NAD(P)H dehydrogenase (quinone)
PLM2_5_b1_sep16_scaffold_2202_12
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(11729..12277)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4ER41_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH85854.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM2_5_b1_sep16_scaffold_2202_13
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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12604..13122
DNA (519bp) protein (173aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000360AC62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM17017.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
Displaying 13 items

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