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PLM2_5_b1_sep16_scaffold_5907

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_5907_1
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1070)
DNA (1068bp) protein (356aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I441_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD67286.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_5907_2
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1326..1733
DNA (408bp) protein (136aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI00035C5285
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE42682.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251).;"
PLM2_5_b1_sep16_scaffold_5907_3
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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1853..2023
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM2_5_b1_sep16_scaffold_5907_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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2020..3063
DNA (1044bp) protein (348aa)
tartrate dehydrogenase (EC:4.1.1.73)
Tartrate dehydrogenase {ECO:0000313|EMBL:ACZ40918.1}; EC=4.1.1.73 {ECO:0000313|EMBL:ACZ40918.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Tartrate dehydrogenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAS5_SPHTD
PLM2_5_b1_sep16_scaffold_5907_5
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3187..4200)
DNA (1014bp) protein (338aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N444_9ACTO
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EIF91791.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
2-oxoglutarate ferredoxin oxidoreductase subunit beta
PLM2_5_b1_sep16_scaffold_5907_6
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(4193..6043)
DNA (1851bp) protein (617aa)
korA; 2-oxoacid:ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit Tax=Modestobacter marinus (strain BC501) RepID=I4F3W9_MODMB
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:KGH48405.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
PLM2_5_b1_sep16_scaffold_5907_7
unknown

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comp(6202..6543)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_5907_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6732..7136
DNA (405bp) protein (135aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
NADH-quinone oxidoreductase subunit B Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A440_THECD
PLM2_5_b1_sep16_scaffold_5907_9
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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7114..7656
DNA (543bp) protein (181aa)
NADH-quinone oxidoreductase {ECO:0000256|RuleBase:RU003582}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003582};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
NADH dehydrogenase Tax=Salinispora arenicola RepID=UPI00037209DA
NADH dehydrogenase (ubiquinone) 30 kDa subunit
PLM2_5_b1_sep16_scaffold_5907_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7653..8069
DNA (417bp) protein (139aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
NADH-quinone oxidoreductase subunit I Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A436_THECD
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
PLM2_5_b1_sep16_scaffold_5907_11
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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8141..8902
DNA (762bp) protein (254aa)
htpX; membrane-associated Zn-dependent endopeptidase; self-cleaved (EC:3.4.24.-)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188, ECO:0000313|EMBL:CCG05239.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Protease HtpX homolog Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RPI0_BLASD
Displaying 11 items

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