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PLM2_5_b1_sep16_scaffold_1357

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1357_1
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..205
DNA (204bp) protein (68aa)
GntR family transcriptional regulator Tax=Bradyrhizobium japonicum RepID=UPI00036356B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJZ30920.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
PLM2_5_b1_sep16_scaffold_1357_2
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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255..1226
DNA (972bp) protein (324aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI0003604F02
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL75198.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
PLM2_5_b1_sep16_scaffold_1357_3
unknown

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comp(1341..1502)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1357_4
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1664..2851)
DNA (1188bp) protein (396aa)
Diguanylate cyclase Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VPJ8_RHOPX
Phytochrome-like protein cph2 {ECO:0000313|EMBL:GAJ37863.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
diguanylate cyclase
PLM2_5_b1_sep16_scaffold_1357_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3133..4419)
DNA (1287bp) protein (429aa)
Transcriptional regulator, TetR family Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBN1_METNO
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49189.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Transcriptional regulator, TetR family
PLM2_5_b1_sep16_scaffold_1357_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4416..5405)
DNA (990bp) protein (330aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein Tax=Cupriavidus sp. HMR-1 RepID=L2EF24_9BURK
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49188.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Oligopeptide transport ATP-binding protein OppF
PLM2_5_b1_sep16_scaffold_1357_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5409..6428)
DNA (1020bp) protein (340aa)
ABC transporter ATPase Tax=Cupriavidus basilensis OR16 RepID=H1S7D1_9BURK
Oligopeptide transport system permease protein OppB
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM2_5_b1_sep16_scaffold_1357_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6425..8131)
DNA (1707bp) protein (569aa)
Peptide ABC transporter substrate-binding protein Tax=Cupriavidus sp. HPC(L) RepID=V2GBR1_9BURK
dppA3; ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM2_5_b1_sep16_scaffold_1357_9
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8170..9066)
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component Tax=Cupriavidus basilensis OR16 RepID=H1S7D3_9BURK
Dipeptide transport system permease protein DppC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24616.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
PLM2_5_b1_sep16_scaffold_1357_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9066..10022)
DNA (957bp) protein (319aa)
ABC transporter permease Tax=Ralstonia sp. GA3-3 RepID=R7XJ08_9RALS
dppB3; ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM2_5_b1_sep16_scaffold_1357_11
unknown

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10179..10373
DNA (195bp) protein (65aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1357_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10466..14098)
DNA (3633bp) protein (1211aa)
Fused DNA-binding transcriptional regulator proline dehydrogenase pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:CDX44553.1}; EC=1.2.1.88 {ECO:0000313|EMBL:CDX44553.1};; EC=1.5.5.2 {ECO:0000313|EMBL:CDX44553.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Tax=Mesorhizobium sp. L103C120A0 RepID=V7HES8_9RHIZ
PLM2_5_b1_sep16_scaffold_1357_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14110..14301)
DNA (192bp) protein (64aa)
Putative L-lactate dehydrogenase Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3U6_AZOC5
L-lactate dehydrogenase
Putative L-lactate dehydrogenase {ECO:0000313|EMBL:BAF87653.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM2_5_b1_sep16_scaffold_1357_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14393..15424)
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase GroES domain protein Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BK88_RHIRD
L-idonate 5-dehydrogenase {ECO:0000313|EMBL:CDN94766.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
IdnD L-idonate 5-dehydrogenase
PLM2_5_b1_sep16_scaffold_1357_15
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15471..15866)
DNA (396bp) protein (132aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EUB98896.1}; EC=1.1.1.69 {ECO:0000313|EMBL:EUB98896.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
gno; Gluconate 5-dehydrogenase (EC:1.1.1.69)
Uncharacterized protein Tax=Rhizobium sp. CF080 RepID=J2KZ96_9RHIZ
Displaying 15 items

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