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PLM2_5_b1_sep16_scaffold_1421

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1421_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..189
DNA (189bp) protein (63aa)
SSS family solute:Na+ symporter Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HD26_9BRAD
Sodium:solute symporter {ECO:0000313|EMBL:KJC44820.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
monocarboxylic acid permease
PLM2_5_b1_sep16_scaffold_1421_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(173..1162)
DNA (990bp) protein (330aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI00036D5153
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM2_5_b1_sep16_scaffold_1421_3
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1201..2934)
DNA (1734bp) protein (578aa)
Putative acetolactate synthase Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8Y1_9BRAD
putative acetolactate synthase
Putative acetolactate synthase {ECO:0000313|EMBL:BAM89892.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM2_5_b1_sep16_scaffold_1421_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2938..3735)
DNA (798bp) protein (266aa)
2-keto-4-pentenoate hydratase Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003777D2A
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KJC44823.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
putative fumarylacetoacetate (FAA) hydrolase protein
PLM2_5_b1_sep16_scaffold_1421_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3755..5122)
DNA (1368bp) protein (456aa)
monooxygenase (EC:1.14.13.-)
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GS11_9BRAD
Monooxygenase {ECO:0000313|EMBL:KJC58240.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
PLM2_5_b1_sep16_scaffold_1421_6
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5155..6207)
DNA (1053bp) protein (351aa)
Probable malate dehydrogenase Tax=Bradyrhizobium sp. S23321 RepID=I0GF55_9BRAD
malate dehydrogenase
Probable malate dehydrogenase {ECO:0000313|EMBL:BAL79392.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
PLM2_5_b1_sep16_scaffold_1421_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6550..10668
DNA (4119bp) protein (1373aa)
Bll7580 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89D63_BRADU
Uncharacterized protein {ECO:0000313|EMBL:BAR55497.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1421_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10694..10987)
DNA (294bp) protein (98aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002DF8FFE
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49262.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1421_9

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comp(11180..11284)
DNA (105bp) protein (35aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCL9_9BRAD
Marine sediment metagenome DNA, contig: S03H2_S04227 {ECO:0000313|EMBL:GAH51575.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1421_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11342..12874)
DNA (1533bp) protein (511aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Caulobacter sp. (strain K31) RepID=B0T1X9_CAUSK
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABZ73740.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
PLM2_5_b1_sep16_scaffold_1421_11
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13186..13653)
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6K9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF80388.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1421_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13769..13954
DNA (186bp) protein (62aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002E3AC53
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49261.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
conserved exported hypothetical protein
PLM2_5_b1_sep16_scaffold_1421_13
unknown

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13999..14796
DNA (798bp) protein (266aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1421_14
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14809..15285
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IA14_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC44840.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
transcription factor jumonji jmjC domain protein
Displaying 14 items

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