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PLM2_5_b1_sep16_scaffold_1749

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1749_trna_1
unknown

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comp(376..448)
DNA (73bp)
transferRNA Lys
PLM2_5_b1_sep16_scaffold_1749_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(623..1231)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003630644
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44273.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1749_2
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1460..3106)
DNA (1647bp) protein (549aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI0003678038
Uncharacterized protein {ECO:0000313|EMBL:KJC39447.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
conserved exported hypothetical protein
PLM2_5_b1_sep16_scaffold_1749_3
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3212..4537)
DNA (1326bp) protein (442aa)
C4-dicarboxylate ABC transporter permease Tax=Bradyrhizobium elkanii RepID=UPI00037874E8
TRAP-type C4-dicarboxylate transport system, large permease component (DctM subunit) {ECO:0000313|EMBL:CCD94854.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
dctM; TRAP C4-dicarboxylate transport system permease DctM
PLM2_5_b1_sep16_scaffold_1749_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4534..5109)
DNA (576bp) protein (192aa)
C4-dicarboxylate ABC transporter permease Tax=Bradyrhizobium elkanii RepID=UPI00035FF854
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:ABD88775.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM2_5_b1_sep16_scaffold_1749_5
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5252..6250)
DNA (999bp) protein (333aa)
TRAP-Type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) Tax=Bradyrhizobium sp. ORS 375 RepID=H0SKX5_9BRAD
TRAP-Type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) {ECO:0000313|EMBL:CCD94852.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
dctP; TRAP dicarboxylate family transporter subunit DctP
PLM2_5_b1_sep16_scaffold_1749_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6754..8313)
DNA (1560bp) protein (520aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
2-isopropylmalate synthase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEC1_9BRAD
leuA; 2-isopropylmalate synthase
PLM2_5_b1_sep16_scaffold_1749_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9415..9951)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Afipia sp. 1NLS2 RepID=D6VA97_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07662.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1749_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10354..10590)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PH6_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KJC57377.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1749_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11297..11632)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI00035D1A8F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64789.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM2_5_b1_sep16_scaffold_1749_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12328..13071
DNA (744bp) protein (248aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI00037273CC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08372.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM2_5_b1_sep16_scaffold_1749_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13368..13595)
DNA (228bp) protein (76aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI00035E622A
Dodecin flavoprotein {ECO:0000313|EMBL:KJC50063.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1749_12
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13743..14381)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Collimonas fungivorans (strain Ter331) RepID=G0ABW9_COLFT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK61925.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Displaying 13 items

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