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PLM2_5_b1_sep16_scaffold_7404

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_7404_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..146
DNA (144bp) protein (48aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036E3F9A
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46068.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_7404_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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188..1513
DNA (1326bp) protein (442aa)
Alpha amylase catalytic region Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGW9_9BRAD
Alpha amylase catalytic region {ECO:0000313|EMBL:CCE05707.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
alpha amylase catalytic region
PLM2_5_b1_sep16_scaffold_7404_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1553..1888)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TG22_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05410.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
conserved exported hypothetical protein
PLM2_5_b1_sep16_scaffold_7404_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1939..4023)
DNA (2085bp) protein (695aa)
Methyl-accepting chemotaxis protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DG81_BRAJP
Chemotaxis protein {ECO:0000313|EMBL:KGT76746.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
methyl-accepting chemotaxis protein
PLM2_5_b1_sep16_scaffold_7404_5
unknown

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comp(4470..4598)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_7404_6
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4807..5337
DNA (531bp) protein (177aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Peptide methionine sulfoxide reductase MsrA Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCY5_MESCW
PLM2_5_b1_sep16_scaffold_7404_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5487..6077
DNA (591bp) protein (197aa)
Phenylacetic acid degradation operon negative regulatory protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IG65_9BRAD
Phenylacetic acid degradation operon negative regulatory protein {ECO:0000313|EMBL:ERF81479.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative NADPH-dependent FMN reductase
PLM2_5_b1_sep16_scaffold_7404_8
unknown

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comp(6288..7085)
DNA (798bp) protein (266aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_7404_9
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7276..7710)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZHB9_9BRAD
conserved membrane hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM92981.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM2_5_b1_sep16_scaffold_7404_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7900..8133
DNA (234bp) protein (78aa)
Family 3 adenylate cyclase Tax=Microvirga sp. WSM3557 RepID=I4YL88_9RHIZ
Adenylate cyclase {ECO:0000313|EMBL:KJC35387.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Adenylate cyclase, family 3 (some proteins containing HAMP domain)
PLM2_5_b1_sep16_scaffold_7404_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8222..9274
DNA (1053bp) protein (351aa)
Family 3 adenylate cyclase Tax=Microvirga sp. WSM3557 RepID=I4YL88_9RHIZ
Adenylate cyclase {ECO:0000313|EMBL:KJC35387.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
guanylate/adenylate cyclase
PLM2_5_b1_sep16_scaffold_7404_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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9306..9698
DNA (393bp) protein (131aa)
Anti-sigma factor, ChrR Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HEH7_ACHXA
anti-sigma factor, ChrR
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 12 items

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