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PLM2_5_b1_sep16_scaffold_3463

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_3463_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..209
DNA (207bp) protein (69aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003669218
Uncharacterized protein {ECO:0000313|EMBL:KJC36091.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3463_2
unknown

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comp(788..880)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_3463_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1660..2310)
DNA (651bp) protein (217aa)
Putative uncharacterized protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZ79_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53962.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3463_4
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2322..3353)
DNA (1032bp) protein (344aa)
Selenium-binding protein 1 Tax=Rhizobium mongolense RepID=UPI0003B49C70
selenium-binding protein
Selenium-binding protein {ECO:0000313|EMBL:AJD40181.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
PLM2_5_b1_sep16_scaffold_3463_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4193..5749)
DNA (1557bp) protein (519aa)
Putative integral membrane protein Tax=Bradyrhizobium sp. WSM471 RepID=H5YAB1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44032.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative regulatory protein
PLM2_5_b1_sep16_scaffold_3463_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5921..7207
DNA (1287bp) protein (429aa)
Benzoate transporter bin=GWD2_Deltaproteobacteria_55_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
benzoate transporter
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM2_5_b1_sep16_scaffold_3463_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7833..8999)
DNA (1167bp) protein (389aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA polymerase IV Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKL2_NITHX
PLM2_5_b1_sep16_scaffold_3463_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9134..9433)
DNA (300bp) protein (100aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002E2AA43
Uncharacterized protein {ECO:0000313|EMBL:KJC36088.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3463_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9661..10026
DNA (366bp) protein (122aa)
CheY-like receiver domain-containing protein Tax=Bradyrhizobium sp. YR681 RepID=J2WTA1_9BRAD
Chemotaxis protein CheY {ECO:0000313|EMBL:KJC58819.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
response regulator receiver domain-containing protein
PLM2_5_b1_sep16_scaffold_3463_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10039..11412
DNA (1374bp) protein (458aa)
Response regulator PleD Tax=Bradyrhizobium sp. S23321 RepID=I0G6A9_9BRAD
Response regulator PleD {ECO:0000313|EMBL:KJC36086.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
response regulator PleD
PLM2_5_b1_sep16_scaffold_3463_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11579..12178)
DNA (600bp) protein (200aa)
TetR family transcriptional regulator Tax=Bradyrhizobium japonicum RepID=UPI0003726663
TetR family transcriptional regulator {ECO:0000313|EMBL:KJC58821.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
TetR family transcriptional regulator
PLM2_5_b1_sep16_scaffold_3463_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12313..13545
DNA (1233bp) protein (411aa)
Arabinose efflux permease family protein Tax=Bradyrhizobium sp. YR681 RepID=J2WAX0_9BRAD
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJN15907.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
major facilitator superfamily transporter
PLM2_5_b1_sep16_scaffold_3463_13
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13816..13983)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 Tax=Bradyrhizobiaceae RepID=RL33_BRADU
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
rpmG; 50S ribosomal protein L33
PLM2_5_b1_sep16_scaffold_3463_14
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14110..14268)
DNA (159bp) protein (53aa)
Nitrilotriacetate monooxygenase component A Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6H9_BRAJP
nitrilotriacetate monooxygenase component A
Nitrilotriacetate monooxygenase component A {ECO:0000313|EMBL:BAL09865.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
Displaying 14 items

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