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PLM2_5_b1_sep16_scaffold_4754

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_4754_1
unknown

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comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4754_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23..349)
DNA (327bp) protein (109aa)
Alpha/beta fold superfamily hydrolase Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJG6_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:KJC54021.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
magnesium chelatase accessory protein
PLM2_5_b1_sep16_scaffold_4754_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(400..1170)
DNA (771bp) protein (257aa)
membrane protein Tax=Bradyrhizobium japonicum RepID=UPI000366AB26
Membrane protein {ECO:0000313|EMBL:KJC54020.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_4754_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1328..2902
DNA (1575bp) protein (525aa)
membrane protein Tax=Bradyrhizobium japonicum RepID=UPI000378A75A
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44032.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
membrane protein
PLM2_5_b1_sep16_scaffold_4754_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3059..3589
DNA (531bp) protein (177aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218K1_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87185.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM2_5_b1_sep16_scaffold_4754_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3551..3943)
DNA (393bp) protein (131aa)
gamma-carboxymuconolactone decarboxylase Tax=Bradyrhizobium elkanii RepID=UPI0002ECFD41
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ERF86057.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
pcaC; gamma-carboxymuconolactone decarboxylase
PLM2_5_b1_sep16_scaffold_4754_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4107..4889)
DNA (783bp) protein (261aa)
3-oxoadipate enol-lactonase Tax=Bradyrhizobium elkanii RepID=UPI0002E24DF7
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:KJC36997.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
pcaD; B-ketoadipate enol-lactone hydrolase
PLM2_5_b1_sep16_scaffold_4754_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4925..6280)
DNA (1356bp) protein (452aa)
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
3-carboxy-cis,cis-muconate cycloisomerase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQ20_9BRAD
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:ERF86055.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
PLM2_5_b1_sep16_scaffold_4754_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6450..6896
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IT78_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86054.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
carbon monoxide dehydrogenase CoxG accessory protein
PLM2_5_b1_sep16_scaffold_4754_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7089..7574
DNA (486bp) protein (162aa)
Carbon-monoxide dehydrogenase small subunit Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HML0_9BRAD
carbon monoxide dehydrogenase small subunit
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:ERF86053.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
PLM2_5_b1_sep16_scaffold_4754_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7604..8410
DNA (807bp) protein (269aa)
Molybdopterin dehydrogenase, FAD-binding Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218J2_RHOPB
molybdopterin dehydrogenase
Molybdopterin dehydrogenase, FAD-binding {ECO:0000313|EMBL:ABD87194.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM2_5_b1_sep16_scaffold_4754_12
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8448..9353
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D290_BRAJP
ATPase
ATPase {ECO:0000313|EMBL:KJC39721.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
PLM2_5_b1_sep16_scaffold_4754_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9482..9706
DNA (225bp) protein (75aa)
VWA containing CoxE family protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07R27_RHOP5
von Willebrand factor A {ECO:0000313|EMBL:KIZ33122.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
VWA domain CoxE-like family protein
Displaying 13 items

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