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PLM2_5_b1_sep16_scaffold_6275

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_6275_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1449
DNA (1449bp) protein (483aa)
DEAD/DEAH box helicase-like Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210E8_RHOPB
DEAD/DEAH box helicase-like protein
DEAD/DEAH box helicase-like {ECO:0000313|EMBL:ABD89238.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM2_5_b1_sep16_scaffold_6275_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1474..1755
DNA (282bp) protein (94aa)
Translation initiation factor IF-1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=IF1_RHOPB
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
PLM2_5_b1_sep16_scaffold_6275_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2029..2235
DNA (207bp) protein (69aa)
Cold-shock DNA-binding protein family Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210E6_RHOPB
cold-shock DNA-binding domain-containing protein
Cold-shock protein {ECO:0000313|EMBL:KIZ45152.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
PLM2_5_b1_sep16_scaffold_6275_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2344..2976)
DNA (633bp) protein (211aa)
TadE-like Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210E5_RHOPB
TadE-like
TadE-like {ECO:0000313|EMBL:ABD89241.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM2_5_b1_sep16_scaffold_6275_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2973..3479)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8NUW7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34122.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
TadE family protein
PLM2_5_b1_sep16_scaffold_6275_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3744..4226)
DNA (483bp) protein (161aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002EECEFC
Uncharacterized protein {ECO:0000313|EMBL:CCE07664.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_6275_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4381..5208)
DNA (828bp) protein (276aa)
sterol desaturase Tax=Bradyrhizobium elkanii RepID=UPI000367CC9E
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46676.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
sterol desaturase
PLM2_5_b1_sep16_scaffold_6275_8
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5530..5694
DNA (165bp) protein (55aa)
Putative Flp/Fap pilin component Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ERW7_BRASB
Flp/Fap pilin component
Putative Flp/Fap pilin component {ECO:0000313|EMBL:ABQ38911.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PLM2_5_b1_sep16_scaffold_6275_9
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6011..6535
DNA (525bp) protein (175aa)
Putative type IV prepilin peptidase, cpaA Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMI1_9BRAD
Putative type IV prepilin peptidase, cpaA {ECO:0000313|EMBL:CCE07669.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
peptidase A24A, prepilin type IV
PLM2_5_b1_sep16_scaffold_6275_10
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6644..7456
DNA (813bp) protein (271aa)
Putative pilus assembly protein, CpaB Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZFH9_9BRAD
putative pilus assembly protein, CpaB
Putative pilus assembly protein, CpaB {ECO:0000313|EMBL:BAM92573.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM2_5_b1_sep16_scaffold_6275_11
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7474..8697
DNA (1224bp) protein (408aa)
Putative Pilus assembly protein cpaC putative signal peptide Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YM08_BRASO
pilus assembly protein CpaC
Putative Pilus assembly protein cpaC putative signal peptide {ECO:0000313|EMBL:CAL74934.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Displaying 11 items

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