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PLM2_5_b1_sep16_scaffold_8488

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_8488_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..336
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PBN3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38149.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_8488_2
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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392..1255
DNA (864bp) protein (288aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z7K1_9BRAD
2-dehydro-3-deoxyphosphooctonate aldolase
PLM2_5_b1_sep16_scaffold_8488_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1292..2470
DNA (1179bp) protein (393aa)
major facilitator transporter Tax=Bradyrhizobium elkanii RepID=UPI00036FE721
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU42891.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_8488_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2657..2884
DNA (228bp) protein (76aa)
C4-dicarboxylate ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI0003789AB1
Uncharacterized protein {ECO:0000313|EMBL:KFC74446.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_8488_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2881..3717
DNA (837bp) protein (279aa)
Blr6317 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GM8_BRADU
hypothetical protein
Blr6317 protein {ECO:0000313|EMBL:BAC51582.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM2_5_b1_sep16_scaffold_8488_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3781..4254)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris RepID=Q6N1D0_RHOPA
Uncharacterized protein {ECO:0000313|EMBL:KJC57341.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_8488_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4503..4955)
DNA (453bp) protein (151aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818}; EC=1.7.1.13 {ECO:0000255|HAMAP-Rule:MF_00818};; 7-cyano-7-carbaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000255|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000255|HAMAP-Rule:MF_00818}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
7-cyano-7-deazaguanine reductase Tax=Bradyrhizobium japonicum RepID=UPI0003677612
7-cyano-7-deazaguanine reductase
PLM2_5_b1_sep16_scaffold_8488_8
bacterium YEK0313, Bacteria

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comp(5012..5386)
DNA (375bp) protein (125aa)
Cytochrome c family protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R803_PHEZH
Cytochrome c2 {ECO:0000313|EMBL:CEJ12301.1}; Flags: Precursor;; species="Bacteria.;" source="bacterium YEK0313.;"
cytochrome c family protein
PLM2_5_b1_sep16_scaffold_8488_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5383..6375)
DNA (993bp) protein (331aa)
Blr4795 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89KV5_BRADU
Putative Hydrolase {ECO:0000313|EMBL:KGJ70355.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hydrolase
PLM2_5_b1_sep16_scaffold_8488_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6551..7702
DNA (1152bp) protein (384aa)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000255|HAMAP-Rule:MF_00318}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Enolase Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=ENO_RHOPT
eno; phosphopyruvate hydratase
Displaying 10 items

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