ggKbase home page

PLM2_5_b1_sep16_scaffold_2549

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2549_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2329
DNA (2328bp) protein (776aa)
preprotein translocase subunit SecA Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003731052
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
secA; preprotein translocase subunit SecA
PLM2_5_b1_sep16_scaffold_2549_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2814..4391)
DNA (1578bp) protein (526aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZGX9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC51750.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2549_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4592..5542)
DNA (951bp) protein (317aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha Tax=Bradyrhizobium elkanii RepID=UPI0003793A6D
PLM2_5_b1_sep16_scaffold_2549_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5755..6714)
DNA (960bp) protein (320aa)
tyrosine recombinase XerD Tax=Bradyrhizobium japonicum RepID=UPI00037E5FD5
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
recombinase XerD
PLM2_5_b1_sep16_scaffold_2549_5
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6908..7054)
DNA (147bp) protein (49aa)
Uncharacterized protein Tax=Bradyrhizobium sp. WSM1253 RepID=I2QLJ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG60654.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2549_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7272..7856
DNA (585bp) protein (195aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Shikimate kinase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I947_9BRAD
shikimate kinase
PLM2_5_b1_sep16_scaffold_2549_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7853..9007
DNA (1155bp) protein (385aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
3-dehydroquinate synthase Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDB4_BRAJP
3-dehydroquinate synthase
PLM2_5_b1_sep16_scaffold_2549_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9078..10385
DNA (1308bp) protein (436aa)
Thioredoxin reductase (NADPH) Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5L7_9BRAD
Thioredoxin reductase (NADPH) {ECO:0000313|EMBL:ERF80033.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
membrane protein
PLM2_5_b1_sep16_scaffold_2549_9
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10391..10933)
DNA (543bp) protein (181aa)
Putative uncharacterized protein Tax=Streptomyces griseoaurantiacus M045 RepID=F3NAQ8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGG49367.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2549_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10960..11253)
DNA (294bp) protein (98aa)
BolA family transcriptional regulator Tax=Bradyrhizobium elkanii RepID=UPI00030C7D87
BolA family transcriptional regulator {ECO:0000313|EMBL:KJC60488.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2549_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11362..12027
DNA (666bp) protein (222aa)
Heat shock protein DnaJ-like Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BX5_RHOPB
heat shock protein DnaJ-like
Heat shock protein DnaJ-like {ECO:0000313|EMBL:ABD86111.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM2_5_b1_sep16_scaffold_2549_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12113..13216)
DNA (1104bp) protein (368aa)
citrate synthase Tax=Bradyrhizobium elkanii RepID=UPI00030EE2A6
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
citrate synthase
PLM2_5_b1_sep16_scaffold_2549_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13289..14014
DNA (726bp) protein (242aa)
Citrate synthase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H4R3_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49758.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cisZ; citrate synthase
Displaying 13 items

View Taxonomy