ggKbase home page

PLM2_5_b1_sep16_scaffold_42230

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_42230_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..314)
DNA (312bp) protein (104aa)
Peptide/nickel transport system ATP-binding protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBT5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47307.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_42230_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(381..1397)
DNA (1017bp) protein (339aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00030A048A
PLM2_5_b1_sep16_scaffold_42230_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1452..2186
DNA (735bp) protein (245aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003025110
cobalamin 5'-phosphate synthase
PLM2_5_b1_sep16_scaffold_42230_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2341..2664
DNA (324bp) protein (108aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00035FE653
Alpha-ribazole phosphatase {ECO:0000313|EMBL:KIZ47291.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
phosphoglycerate mutase
PLM2_5_b1_sep16_scaffold_42230_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2758..3099)
DNA (342bp) protein (114aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00030CC686
DNA methyltransferase {ECO:0000313|EMBL:KJC33810.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_42230_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3214..4002)
DNA (789bp) protein (263aa)
Methylglutaconyl-CoA hydratase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBS8_9BRAD
Methylglutaconyl-CoA hydratase {ECO:0000313|EMBL:ERF81045.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
oxidoreductase
PLM2_5_b1_sep16_scaffold_42230_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4170..4553
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7N0_BRAJP
Cupin {ECO:0000313|EMBL:KJC38580.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
cupin
PLM2_5_b1_sep16_scaffold_42230_8
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4607..5131)
DNA (525bp) protein (175aa)
Putative transcriptional regulatory protein Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ERI4_BRASB
transcriptional regulator
Putative transcriptional regulatory protein {ECO:0000313|EMBL:ABQ38778.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PLM2_5_b1_sep16_scaffold_42230_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5229..5774
DNA (546bp) protein (182aa)
Putative pyrimidine reductase Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z2K2_9BRAD
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:ETR77108.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
putative pyrimidine reductase
PLM2_5_b1_sep16_scaffold_42230_10
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5784..5888
DNA (105bp) protein (35aa)
Glutathione S-transferase Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIK2_MESAW
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGB43883.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Displaying 10 items

View Taxonomy