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PLM2_5_b1_sep16_scaffold_5380_8

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(8645..9271)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 208.0
  • Bit_score: 388
  • Evalue 7.50e-106
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 208.0
  • Bit_score: 388
  • Evalue 3.70e-105
DNA-directed RNA polymerase subunit beta' Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RPOC_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 208.0
  • Bit_score: 388
  • Evalue 2.60e-105

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
CTGCAGGACGGCGACATCGTCGAAAAGGGCGATTTCATCGTCGAAGGCAATCCGGCGCCGCACGACATCCTGGCGATCAAGGGCATCGAGGAACTCGCGGCCTATCTGGTCAACGAGATCCAGGAGGTCTACCGGCTGCAGGGCGTGCTGATCAACGACAAGCACATCGAAGTGATTGTCCGTCAGATGCTGCAGAAGGTGGAGATCACCGACCAGGGCGAGACCGACATGATCTCTGGCGAACAGATCGACAAGATCGAGTTCGACGTGATCAACGCCAAGGCCAAGGAAGAGGGCAAGAAGATCGCCACGGGAACGCCGGTGTTGCTCGGCATTACCAAGGCGAGCTTGCAGACCCGCTCGTTCTTCTCGGCGGCCTCGTTCCAGGAGACCACCCGCGTGCTCACCGAAGCCGCCGTCAACGGCAAGGTGGATCCGCTCGAAGGCCTCAAGGAAAACGTCATTGTCGGCCGGTTGATCCCGGCGGGCACCGGCGCCTCGATGGCCAAGATCCGCGAAGTCGCTGTGAAACGCGACAAGCTGATTCTCGACGAACGCGAAAAGCAGGCCACGATCGTGCCTGCGGCACCGGAAGTCGAACCGCTGGCGCTGCCGCCGGCGGAATAA
PROTEIN sequence
Length: 209
LQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQIDKIEFDVINAKAKEEGKKIATGTPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAVKRDKLILDEREKQATIVPAAPEVEPLALPPAE*