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PLM2_5_b1_sep16_scaffold_5380

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_5380_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
30S ribosomal protein S7 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=RS7_BRADU
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM2_5_b1_sep16_scaffold_5380_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(262..633)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RS12_RHOPB
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM2_5_b1_sep16_scaffold_5380_3
unknown

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comp(1072..1548)
DNA (477bp) protein (159aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_5380_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1490..3586)
DNA (2097bp) protein (699aa)
ABC transporter subfamily B Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5H4_9BRAD
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KJC46300.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ABC transporter
PLM2_5_b1_sep16_scaffold_5380_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3820..5874)
DNA (2055bp) protein (685aa)
ATP-dependent Lon protease Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HJP3_9BRAD
ATP-dependent Lon protease {ECO:0000313|EMBL:ERF85048.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_5380_6
unknown

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comp(5832..6338)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_5380_7
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7877..8413
DNA (537bp) protein (179aa)
Transcriptional regulatory protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TQZ4_9BRAD
Transcriptional regulatory protein {ECO:0000313|EMBL:CCE08882.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
transcriptional regulator
PLM2_5_b1_sep16_scaffold_5380_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8645..9271)
DNA (627bp) protein (209aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA-directed RNA polymerase subunit beta' Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RPOC_NITHX
Displaying 8 items

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